Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_0198 |
Symbol | |
ID | 3964776 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 254575 |
End bp | 256242 |
Gene Length | 1668 bp |
Protein Length | 555 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637919258 |
Product | exodeoxyribonuclease VII large subunit |
Protein accession | YP_525674 |
Protein GI | 90019847 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1570] Exonuclease VII, large subunit |
TIGRFAM ID | [TIGR00237] exodeoxyribonuclease VII, large subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGGCA GCGAACAAGG AACCGAACAA GGTGAAGGAC TTGATGTTTT CCTAAATCGG ATTGGGACCG CACTCAAAAC GCAATTGCCA GGAAGCTATT GGGTTCGCGC AGAAATACTC AAAGCCGACA CATCGAAAGG TAATCATTTA TCTTTAGAGC TAGCATCCTA CGATGGATCG CAGGGAGCTA AAGCTCGCGC TTGGATCTGG TCATCCAATA TCAACATTGT ATCTTCTTTT GAGCAATCAA CTGGCTCCAG CTTGAAAGCC GGTCTAAAAA TTCTTTTTCA ATGCCGGGTG CAGTTTCATC CTGAATTTGG TCTTTCTCTG GTCGTAGAGA ATATCGATCC TAAATTTACG TTAGGCGACA TGGAGGCCAA GCTCCAAGCG ATTAGAGAGC GCCTAACTTC GCTGAACGAG ATTAACCGCA ATAGATATTT GGACAAGCCC AAAGATTTTT GTCGCGTCGC GGTGGTATCG CCAGAATCTG CAGCCGGATT AGGCGACTTT AAAACAATCG CTGATCGACT GGAAAAATAT AATCTATGTA AATTTAATTA TTACCCTTCT CTATTTCAAG GTGCAAATGC TGTGGCTAGT ATTGTTTCAG CAATTTCACA AGTCGTTGTC GATATAGAAA ATGGAAACCA ATACGACGCA TTAGCCATTG TGCGGGGAGG TGGAGACAAA GCTGGGCTCT ATCAACTCAA CGAAATTAAA ATCGCTCGAT GTATATGCCG ATCTCCGATT CCTGTGCTCG TTGGGATTGG ACATGAGCGG GACTCAACCA TACTGGATGA GGTTGCCAAT TGCCGCCTTG CCACTCCTTC TCTCGTAGCC AGCTTTATTC AAGAAGCCAT TGTTAAAAAT GCAAGGGATG CAAAATTTAA CTACGAATTA CTCGTGAGGT CCTCGCAGTC TATCTCATCA TTTGCAAAGC AAGAGCTAAG GGATTATAGA GCAAACATTT CCCTTTTATC ACATAAGAAA CTCGAGTCTG CAAGGCGGCA AGTTACCGAA CATAATACCA GCCTCACACA TGTTCCGAAC TTACTGATTC AAAACGCAAA GAGACAAAAC GAAGAAAATT ACATCAACAT TAAACTATTT TCTGGACGTA GCATCCAACA AGCCAAAGAG CTTGTAAGCG AATCTTTTAG ATCTGCAATA AATGATACCA AGGTTAACAT ACGAAGCATT GGTTCACATA TCCAGCAACT TAAGATTGAT GTTATACGGC GAGCACATCA CTCAACTTCA ACGGCAAAAT CGTCAGTCCA ACATTACAAT ATTCAAATGA GGCAAGGAGC ATCAAATTCG GCTCACCAAG CTAAATCCAG TGTGCTTTAT AAATATGAAG AATCTCTAAA AGCAACAAAG TACTATTTGG GGCAACAGCG GAATGCCATA GAAAATGAAA GTAAATCGCT GAGAGTAAAT GCTGCCCAAT CACTCACTGC AATAAAAAGT GACATTAAGA TCTTGGTGGA ACGAGTGCTA CTACTGGATC CAAGTAAAAT TCTAGCGAAG GGCTTCGCGT TGATAATGTC GAATGAAAAA AAGGTATTGA CCACTAAAAA GGATGTTCTA AAGCAAAAAA ATGTAAGTTT AAGATTAAAA GATGGCTTCG TAGAAGCCCA TATATTGGAG GACAATCATG AGCAATGA
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Protein sequence | MAGSEQGTEQ GEGLDVFLNR IGTALKTQLP GSYWVRAEIL KADTSKGNHL SLELASYDGS QGAKARAWIW SSNINIVSSF EQSTGSSLKA GLKILFQCRV QFHPEFGLSL VVENIDPKFT LGDMEAKLQA IRERLTSLNE INRNRYLDKP KDFCRVAVVS PESAAGLGDF KTIADRLEKY NLCKFNYYPS LFQGANAVAS IVSAISQVVV DIENGNQYDA LAIVRGGGDK AGLYQLNEIK IARCICRSPI PVLVGIGHER DSTILDEVAN CRLATPSLVA SFIQEAIVKN ARDAKFNYEL LVRSSQSISS FAKQELRDYR ANISLLSHKK LESARRQVTE HNTSLTHVPN LLIQNAKRQN EENYINIKLF SGRSIQQAKE LVSESFRSAI NDTKVNIRSI GSHIQQLKID VIRRAHHSTS TAKSSVQHYN IQMRQGASNS AHQAKSSVLY KYEESLKATK YYLGQQRNAI ENESKSLRVN AAQSLTAIKS DIKILVERVL LLDPSKILAK GFALIMSNEK KVLTTKKDVL KQKNVSLRLK DGFVEAHILE DNHEQ
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