| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0100 |
|---|
| Symbol | |
|---|
| ID | 3966000 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharophagus degradans 2-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007912 |
|---|
| Strand | - |
|---|
| Start bp | 123824 |
|---|
| End bp | 125356 |
|---|
| Gene Length | 1533 bp |
|---|
| Protein Length | 510 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 637919159 |
|---|
| Product | deacylase-like |
|---|
| Protein accession | YP_525576 |
|---|
| Protein GI | 90019749 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3608] Predicted deacylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTCATA CCACAAAACC AGTAAAGCGC CTGTTTAACC TTATGATGTT TGGTATTGCG
CTTACCTGCG CCGCCGAGCT TAGCGCCACC GAAGTAGCCG AAACCGAACA GCCAGACGAA
GCCGCACAAC CAACGCAACC GGCAACCGAC AAGGCAACAC TGCCCACAGC AGAAAACATT
AACCTAAGCG AACCGGTTGT AGAGCCCACA CCCCCTGCGC CAAAAACAAA TACTACTGGC
GAAGAAAGTA AGCAACAAAC GCCTACGGCC GCAACGCCTG CCAAACCCGC AGCCAAAAAA
GACGCTAAAC CTGCGCCAAA AGATGTTACC GAACCCAGCC CTGCCCAACC CGAGCAAACC
GAAACGCATG AGGCCGCGCC CAACGAAGCT AGCGAAACCG ATACCGCGCA AGAGCCTACA
GAAGAAGCCG CACCAAGCGA GTCGACACAA GCCACAAGCG AAAGCACCGC AACACCGGTA
GACAATACCC TTAGCCAACA AACACAAGAA GAAGAACCGT GGGTATTTCT CGATACACTT
ATTATGAAGG GGTCCACCAC TCGGCTTTCT TGGTCGCCCG ACCAAAGCTT TGAAGGCATA
GAAACCCCGA CCCCCGTTTT AATTGCGCAC GGCGCCAAGC CCGGGCCAAA ACTGTGCTTA
ACCGCAGCGT TGCATGGCGA TGAACTTAAC GGCATAGAAA TTGTTCGACG CGTGCTATAC
AACATTGACG CCAAAGAACT TGCGGGCACT GTAATTGGTG TGCCCATTGT AAATTTGCAG
GGGTTTCACC GCAGCTCGCG TTATTTAACC GATAGACGCG ATTTAAATCG GTTTTTCCCT
GGTAACCCAA CCGGCAGCTC GGCGTCGCGT ATTGCTTACT CCTTTTTTAA TCGAGTAATT
TCGCACTGCG ACCTGTTGGT AGATTTACAC ACTGGCTCGT TTTATCGCAC CAACTTGCCA
CAACTTAGAG CCAACCTGCG CTCACCAGAA GTAGTGGCCC TTACCCAAAA CTTTGATGCC
ATTGTGGTGT TACACAGCGA AGGCGCACGC GGCACACTGC GTCGCGCAGC GGTGGATGCG
GGTATTCCTG CGGTTACTTT AGAGGCCGGC GGCCCTATGG AGCTTAACGA AGAGCATGTT
GAGCAGGGTG TAAAAGCCAT TAATACCCTG TTAGATAAAA ATGAAATGCT AAATACCATT
AGCTTTTGGG GTACACCGCA ACCCACTTTT TATCGATCGC AATGGGTACG CACCAATCGC
GGCGGCATTT TGTTTAGCGA TGTAAAACTG GGTGGCAAAG TACGCAAAGG CGATACCCTA
GGCGTAGTAA CCGACCCCAT TACAAATTTT AGGCAAGTTA TTTTGTCGCC AGTGAATGGC
CGCATTATAG GTATGGCAGT AAACCAGGTA GTACTACCCG GCTTCGCTGC TTATCACATT
GGTATTACAC CGCGCGAGGT AAACCAATAC GACGAAATTA CGCCGCCACC TGCAAGCGAA
GAAATTATTG AAGAAGATGC GCGTATAGAT TAG
|
|---|
| Protein sequence | MTHTTKPVKR LFNLMMFGIA LTCAAELSAT EVAETEQPDE AAQPTQPATD KATLPTAENI
NLSEPVVEPT PPAPKTNTTG EESKQQTPTA ATPAKPAAKK DAKPAPKDVT EPSPAQPEQT
ETHEAAPNEA SETDTAQEPT EEAAPSESTQ ATSESTATPV DNTLSQQTQE EEPWVFLDTL
IMKGSTTRLS WSPDQSFEGI ETPTPVLIAH GAKPGPKLCL TAALHGDELN GIEIVRRVLY
NIDAKELAGT VIGVPIVNLQ GFHRSSRYLT DRRDLNRFFP GNPTGSSASR IAYSFFNRVI
SHCDLLVDLH TGSFYRTNLP QLRANLRSPE VVALTQNFDA IVVLHSEGAR GTLRRAAVDA
GIPAVTLEAG GPMELNEEHV EQGVKAINTL LDKNEMLNTI SFWGTPQPTF YRSQWVRTNR
GGILFSDVKL GGKVRKGDTL GVVTDPITNF RQVILSPVNG RIIGMAVNQV VLPGFAAYHI
GITPREVNQY DEITPPPASE EIIEEDARID
|
|---|
| |