| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_0052 |
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| Symbol | |
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| ID | 3965360 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 56292 |
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| End bp | 57422 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637919111 |
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| Product | alcohol dehydrogenase class III |
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| Protein accession | YP_525528 |
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| Protein GI | 90019701 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1062] Zn-dependent alcohol dehydrogenases, class III |
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| TIGRFAM ID | [TIGR02818] S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.657136 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGATA CATTTATAAA ATCTAGGGCC GCGGTCGCGT GGGCCGCAGG CGAACCATTA
TCCATAGAAG AAGTAGATGT AATGATGCCC AAGGCCGGCG AAGTGCTGGT TAAAATTGTT
GCTACAGGCG TATGCCACAC AGATGCGTTC ACCCTATCTG GCGAGGACCC AGAGGGTATA
TTCCCTGCCA TATTAGGCCA CGAAGGCGGC GGTATAGTAG AAGCCCTAGG CGAAGGGGTA
ACCAGCGTTG CGGTGGGCGA CCATGTTATC CCCCTGTATA CCCCTGAATG TGGCGAGTGT
AAGTTTTGTT TATCTGGCAA AACTAACCTG TGCCAAAAAA TTCGCGCCAC CCAAGGTAAA
GGCTTAATGC CAGATGGCAC TACCCGCTTT TATAAAGATG GCCAGCCCAT TTACCACTAT
ATGGGCACCT CTACTTTCTC TGAATACACC GTATTACCAG AAATATCCCT AGCCAAAGTA
AACCAAAAAG CACCGCTAGA AGAGGTTTGT TTACTCGGCT GTGGCGTAAC AACCGGTATG
GGCGCAGTAA TGAATACTGC CAAAGTAAAA GAAGGCGATA CCGTAGCCAT TTTCGGTTTA
GGGGGTATTG GCCTATCCGC CGTTATTGGC GCAACCATGG CCAAGGCCAG CCGTATTATC
GCCATTGATA TTAACGAGAG TAAATTTGAG CTAGCCAAAA AGCTGGGCGC CACAGATTGC
ATAAACCCCA AGCTTTACGA CAAGCCCATA CAAGATGTAA TAGTAGAGCT TACCGATGGC
GGCGTGGATT TTTCGTTTGA GTGTATAGGC AACGTGAACG TAATGCGCTC TGCACTTGAG
TGCTGCCATA AGGGCTGGGG CGAATCGATC ATTATTGGGG TAGCCGGTGC TGGGCAAGAA
ATTTCTACCC GCCCTTTCCA ACTCGTTACT GGGCGCGTAT GGCGGGGCAC AGCCTTTGGC
GGTGTGAAAG GCCGCTCAGA ATTACCGGGC ATAGTAGAGC AATATTTGGC GGGCGACTTT
AAATTAGACG ACTTTATTAC CCACACCATG GGCCTAGAAG ATATTAATAC CGCTTTCGAT
TTAATGCATC ACGGCAAAAG TATTCGCTCG GTAATTCATT TCAACAAATA G
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| Protein sequence | MTDTFIKSRA AVAWAAGEPL SIEEVDVMMP KAGEVLVKIV ATGVCHTDAF TLSGEDPEGI
FPAILGHEGG GIVEALGEGV TSVAVGDHVI PLYTPECGEC KFCLSGKTNL CQKIRATQGK
GLMPDGTTRF YKDGQPIYHY MGTSTFSEYT VLPEISLAKV NQKAPLEEVC LLGCGVTTGM
GAVMNTAKVK EGDTVAIFGL GGIGLSAVIG ATMAKASRII AIDINESKFE LAKKLGATDC
INPKLYDKPI QDVIVELTDG GVDFSFECIG NVNVMRSALE CCHKGWGESI IIGVAGAGQE
ISTRPFQLVT GRVWRGTAFG GVKGRSELPG IVEQYLAGDF KLDDFITHTM GLEDINTAFD
LMHHGKSIRS VIHFNK
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