| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_4384 |
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| Symbol | |
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| ID | 4841315 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS155 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009036 |
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| Strand | + |
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| Start bp | 10 |
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| End bp | 3195 |
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| Gene Length | 3186 bp |
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| Protein Length | 1061 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640110380 |
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| Product | HsdR family type I site-specific deoxyribonuclease |
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| Protein accession | YP_001041692 |
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| Protein GI | 126090237 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0610] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
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| TIGRFAM ID | [TIGR00348] type I site-specific deoxyribonuclease, HsdR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 65 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACACCT TTAAAAAAGA AGCGGATTTT GAACAAGCCT TTGTAGAGGC ACTAACCAAT
AAAGGCTGGG AAAGCGCCGT TTTAAAAAAT AAAACTGAAG CTGATTTACT GCAAAACTGG
GCCAATATTT TATTTGAAAA CAATCGCCAG CGAGACCGAT TAAACGATGT TGCGCTTACC
GCCAGTGAAA TGCAGCAAAT TATTGAGCAA ATAAAAGAAC TCAGAACCCC ATTAAAACTC
AATGGCTTAA TCAACGGTAA AACCGTGGCC ATTAAGCGCG ACAATCCCGA CGATAAAGAG
CACTTTGGTA AAGAAGTCAG CCTCAAAATT TACGACCGCC AAGAAATAGC CGCTGGCCAA
AGCCGCTACC AAATTGCGCA ACAACCCCTA TTTGAACGGG GCAGCCCATT GCGTAATGAC
CGGCGCGGCG ATGTGCTCTT ATTAATTAAC GGCATGCCTG TTATCCATGT GGAGCTTAAG
CGCAGCGGTA TTCCTGTTAG TCAGGCCGTT AATCAAATCG AAAAATACAC CAAAGAAGGT
ATTTTTACCG GCCTATTTTC ACTTATCCAA GTCTTTGTCG CTATGCAGCC GGATGAGACG
AAGTATTTTG CCAACCCCGG GATGGAGGGT AAATTTAACC CCGATTATCA ATTTAACTGG
GCGGATTTTA ATAACGAACC AGTCAATCAC TGGAAAGACA TTACAGCAAC GCTGCTGTCC
ATCCCCATGG CGCACCAGCT CATTGGTTTT TATACCGTCG CCGACGATAC TGATGGCGTG
TTAAAGGTGA TGCGCAGTTA CCAATATTAC GCCGCCAATG CCATCTCCGA TAAAGTGGCT
AAAACTAACT GGCAGCAAAT GGGCAGTAAC GCAAATAACA CTGACCGTTT AGGTGGTTAT
GTTTGGCATA CCACTGGCTC GGGTAAAACC ATGACCAGCT TTAAATCGGC GCAACTCATT
GCTCAATCGA AAGATGCCGA TAAAGTCATT TTCTTAATGG ATCGCATTGA GCTTGGCACT
CAGTCTCTCA CCGAATACCG CGGCTTTGCC GGTGATGGTG AAGATGTGCA AGCAACTGAA
AATACCCATA TATTAATCAC TAAACTCAAA AGCAGTACCC CATCAGAGAC GTTGATTGTG
AGTTCGATTC AAAAAATGAG TAATATTTTT GAAGAGGTTG ACGATACGGG TACTGCGACT
AATTCAGCTG ATATCGAAAA AATTCGTGCC AAGCGCTTAG TGTTTATTAT TGATGAAGCA
CATCGTTCAA CCTTCGGCGA TATGCTTATC GCCATTAAAG CAACCTTCCC CCGCGCATTG
TTTTTTGGTT TCACTGGCAC GCCCATTCAA GAAGAAAACG AAAAAAAGGG CAACACCACC
ACTACGGTAT TTGGTAATGA GTTACATCGC TATAGTATTG CTGACGGTAT TCGCGATGGT
AACGTACTGG GATTTGACCC TTATAGAGTC AGCACATTTA AAGACAAGGA TATAAGGCAA
GCCGTCGCTC TTGAACAAGC CAAAGCCGAT TCGGTGGCCG ATGCACTATC AACCCCCGCT
AAAAAGAAAA AGTTTAATTA CTTTATGAAT GACGTCGCTA TGGCAGGTCA TAAAAATGCT
ACCGGAAAGC ACATCAAAGG CATAGAAGAC CATGTGCCTA AATCGCAATA CCTAACCGAT
GAGCATCAAA AACAAGTCGT GAAAGATATT CTGGACAACT GGGAGGTACT CAGCCAGGCC
AATAAATTTC ATGCCATTTT AGCCACTAAT AGCATTAGCG AGGCCATTGA CTACTATCGC
CGCTTAAAAG ATGCTATGCC AACACTGAAA GTCTCTGCAT TATTTGACCC AAACATTGAC
AACGATGGCA CTGGCAATCG AGGGCCCAGC TTTAAAGGTG ATGGCCTAGA CGAAATAATG
ACTGATTATA ACGTGCGCTA TGGCCAAGAT TTCGACTTTG CTAAACACGC TAAATTTAAA
AAAGATTTAG CCGCACGACT TGCCCATAAA AAACCTTACG AGCGTATACA CACCGAACCT
GCAAAGCAGC TAGATTTACT GATTGTAGTA GACCAAATGC TGACCGGCTT TGACTCCAAA
TGGCTTAATA CCCTGTATTT AGACAAAGTG ATTAAGTACC AAAATATTAT TCAGGCATTT
TCACGCACCA ATCGCTTATT TGGACCAGAC AAACCTCACG GAACGATACG TTACTATCGC
TACCCACACA CGATGGAGCA GCATATCAAA GACGCGGTAA AACTCTATTC TGGCGATAAA
CCCATCGGCT TATTTGTGGA TAGGCTTGAA AGTAACCTTA AAGCAATGAA TGAGTTAGTT
GCAGATATCA CTGAGTTGTT TGTAAACGCT GGTGTGCAAT ATTTTGACAA ATTACCAGAA
GACACCGCAG CCTGCGCTAA ATTTGCCGAC TTATTTAAAT TGTTGAATCA ACATCTTGAA
GCCGCCAAGA TACAAGGCTT TAACTGGAAT GAACTTGTTT ATTCATTTGA GGAAAATGAG
ACGAAACATG ACGTAACACT GGCTATTGAT CAACAAATCT TTTTAAGCCT GGTTCTACGT
TACAAAGAAC TCGTTACCAA AGTCCCCAGT GACGGTGGTG GGGATACGCC ACCATATGAT
ATTAGCGGCA ACATCACCGA AATGGATACT GGAAAAATCA ATGCAGACTA TATGAATAGC
CGCTTTGATA AATATTTAAA AGAGCTAAAT CAACACCAAG ACCATACAAC CATTGAAGGT
ACGCTTAACG AGCTGCATAG TTCATTTTCA TCTCTCACCC AAAGCGAGCA AAAATACGCC
AAACTTTTTT TGAATGATCT ACAGCGTGGT GATGCTCTAC TCACAGATGG GCATAATTTT
AGAGATTATA TTAATGACTA TAAAAATCGT GCAGAAAACA CCCAATTAAA TATCGTTGTT
AACGCATTAG GTTTAGATGT CAGTCTGCTT ACCCGATTAA TGAACGATAA TGTGAACGAG
AAGAACATTA ACAATTTTGG TCGATTTGAT GCGCTTAAAA ACACTGTAGA TAAAACAAAG
GCGAAAGCTT ACTTTGAGAA AGTGGAAGGC ATGGTCATCT CCCCCTTTAA GCTGAACATA
CGTATAGATC AATTTCTTCA AACGTATATT GTTGGACGAG CAGATGCTCT TTTGAGCGAT
GATTAA
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| Protein sequence | MNTFKKEADF EQAFVEALTN KGWESAVLKN KTEADLLQNW ANILFENNRQ RDRLNDVALT
ASEMQQIIEQ IKELRTPLKL NGLINGKTVA IKRDNPDDKE HFGKEVSLKI YDRQEIAAGQ
SRYQIAQQPL FERGSPLRND RRGDVLLLIN GMPVIHVELK RSGIPVSQAV NQIEKYTKEG
IFTGLFSLIQ VFVAMQPDET KYFANPGMEG KFNPDYQFNW ADFNNEPVNH WKDITATLLS
IPMAHQLIGF YTVADDTDGV LKVMRSYQYY AANAISDKVA KTNWQQMGSN ANNTDRLGGY
VWHTTGSGKT MTSFKSAQLI AQSKDADKVI FLMDRIELGT QSLTEYRGFA GDGEDVQATE
NTHILITKLK SSTPSETLIV SSIQKMSNIF EEVDDTGTAT NSADIEKIRA KRLVFIIDEA
HRSTFGDMLI AIKATFPRAL FFGFTGTPIQ EENEKKGNTT TTVFGNELHR YSIADGIRDG
NVLGFDPYRV STFKDKDIRQ AVALEQAKAD SVADALSTPA KKKKFNYFMN DVAMAGHKNA
TGKHIKGIED HVPKSQYLTD EHQKQVVKDI LDNWEVLSQA NKFHAILATN SISEAIDYYR
RLKDAMPTLK VSALFDPNID NDGTGNRGPS FKGDGLDEIM TDYNVRYGQD FDFAKHAKFK
KDLAARLAHK KPYERIHTEP AKQLDLLIVV DQMLTGFDSK WLNTLYLDKV IKYQNIIQAF
SRTNRLFGPD KPHGTIRYYR YPHTMEQHIK DAVKLYSGDK PIGLFVDRLE SNLKAMNELV
ADITELFVNA GVQYFDKLPE DTAACAKFAD LFKLLNQHLE AAKIQGFNWN ELVYSFEENE
TKHDVTLAID QQIFLSLVLR YKELVTKVPS DGGGDTPPYD ISGNITEMDT GKINADYMNS
RFDKYLKELN QHQDHTTIEG TLNELHSSFS SLTQSEQKYA KLFLNDLQRG DALLTDGHNF
RDYINDYKNR AENTQLNIVV NALGLDVSLL TRLMNDNVNE KNINNFGRFD ALKNTVDKTK
AKAYFEKVEG MVISPFKLNI RIDQFLQTYI VGRADALLSD D
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