| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_4253 |
|---|
| Symbol | |
|---|
| ID | 4842171 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS155 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009052 |
|---|
| Strand | - |
|---|
| Start bp | 4980317 |
|---|
| End bp | 4981024 |
|---|
| Gene Length | 708 bp |
|---|
| Protein Length | 235 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 640121531 |
|---|
| Product | histidine utilization repressor |
|---|
| Protein accession | YP_001052587 |
|---|
| Protein GI | 126176438 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2188] Transcriptional regulators |
|---|
| TIGRFAM ID | [TIGR02018] histidine utilization repressor, proteobacterial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGCTATTC CTAAGTTTGC AGAAATTAAG CAATACATTA TCTCCTCTAT CGAATCTGGC
GAGTGGGAAG AAAACGCCCG CGTGCCTTCC GAGAATCAGC TTGCCGACTT GTTTACCTGC
AGCCGAATGA CGGCGCGACG TGCGTTAACC GAGCTTACGG ATAGCGGCGT ACTCGAACGA
GCCCAAGGGC TTGGTACCTT TGTGGCTGGG CGTAAATCCC AGTCGTCTAT GTTGGCGATT
CGCAATATTG CCGATGAAAT TAAAGACCGC GGCCACGGCT ATAGCGTACA GCAATGGGTG
TTAGAACAAA CCGTTGCCAG TACAACTATC GCAATTTCCC TTGGGCTTGA GCGCGGTGCA
AAGGTATTCC ATTCGATCTT AGTGCATTGC GAGCAGGGGT TACCGCTGCA AGTCGAGGAG
CGTTACGTGA ACCCCGAGTT GGTGCCCGAC TATTTATTGC AGGATTTTAC CTTGCAGACG
CCCCACGAAT ATTTATCCCA AGTGGCACCG TTGACCGAGG CGCATCACAC GATTGAGGCG
ATTATCGCCA GCGCCGAATT ACAGCAAAGG CTTGAAATCC CCGCCACAGA GCCCTGTTTA
CAGATTTTAC GCCGTACTTG GTCGCGTCAA GGCGTCGTGA GTTTTGCCAA GTTAGTTCAC
CCCGGCAGCC GCTTTAAACT CGGCGGCCAC TTAACTTTTA GCAAGTAG
|
|---|
| Protein sequence | MAIPKFAEIK QYIISSIESG EWEENARVPS ENQLADLFTC SRMTARRALT ELTDSGVLER
AQGLGTFVAG RKSQSSMLAI RNIADEIKDR GHGYSVQQWV LEQTVASTTI AISLGLERGA
KVFHSILVHC EQGLPLQVEE RYVNPELVPD YLLQDFTLQT PHEYLSQVAP LTEAHHTIEA
IIASAELQQR LEIPATEPCL QILRRTWSRQ GVVSFAKLVH PGSRFKLGGH LTFSK
|
|---|
| |