| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_4007 |
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| Symbol | |
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| ID | 4845072 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS155 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009052 |
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| Strand | + |
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| Start bp | 4703320 |
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| End bp | 4704738 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640121270 |
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| Product | TolC family type I secretion outer membrane protein |
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| Protein accession | YP_001052343 |
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| Protein GI | 126176194 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGACTT CAGCAAGACG ACAATTTCAA TGTTCAAAGA TAGCCATAGT GCTGTCATTG
ATCCTGTTAC CTTTATCGGC TCAAAGCCAG ACGTTAGAAC AAGCCGTTGC ACATACGCTT
GATACGAACC CTGATTTACG GGTTGCCTTT AACCGCTTTA AAGCGCGTGA AGAGCAAGTT
AATCAAGCAA TCGCAGGCTA TATGCCGACG ATTGATGTCA GTGGTGGCTA CGGCTATGAA
CAGACTGATA GCGTGTCGAC CCGTAGACGA CCTAACGTCG GTGAAGTTGA TAGCAAAGGA
GTGGCAGAAT TAAACCGCGG AGAGTTTGGT GTTAGCTTAA AGCAAATGCT TTTCGATGGT
TTCTATACTA GCAGTGAAGT TGATCGTTAT AGCTTTGAAG CCAGTGCCGA CCAATGGGCG
CTACTTGCAG CGGCTGAAGA TATGGCACTC GATGTCAGTA AGGTCTACCT CAACTATTTA
CGCACCGATC AGGTGTTGAA ATTAGCCGAG AAGAACCTTA ACAGCCATAA AGATATTTAT
GACCAAATCA AGCAACGTAC TGATTCAGGT TTAGGTTCAA TTGCAGATCT CTCCCAAATC
ACGGGACGCT TAGCGCGGGC CAATGCCAAC GTGATTTCTG CTCGTAACAA TTTACTTGAT
GCAAAAGCGC AGTACATTAG AATTGTAGAG TCGGCACCAG CAGACTTAAT CTTACCAGTG
CCCGATGCAG AGATGCTGCC AAAGGATCTA AGCTCAGGCA TTATCGAAGC GCAGGAGAAT
CACCCCATAC TCAAATCTGC AGCGAATGAT ATCCGTGCAG CAGAGAATGA ACGCTCTTCA
GTACAATCTA ATTACTATCC TCAGGTTTCT TTAGAGCTGA ATGGTAATTG GAATAATGAT
GTCGGCGGTG AAGATGGTAT CTCTGGCGCA GGAGCCTTCC GCAGTGATGT GGGTGGCTAT
AGCAATGATT TAATGGCCAT GGTTCGAGTA AAATATAACT TATTCTCGGG CGGTAAAGAT
CTTGCCCGTG AGAAAGAAAC GGCCTACAAA CTTGGTGAAG CCAAAGAAAT CCGTCAACGT
GCCCAGCGCG AAGTCGTTGA AGGCGTCAAC CTAGCTTGGA ACGCTTTTGA AATGCTAGCG
CCGCAAAAAC AATACATTCG AGATCATGTT GTGGCCGCAA AGGATACCCA AACAGCCTAT
GCGCAACAGT TCAACTTAGG CCAACGCAGC CTACTCGACT TATTGGATAC CGAAAATGAG
CTCTTCGAAG CACGTAAAGA CTACTTACAA GCCGAATATG ACGAGATCAT CGCTAAGTAT
CGCGTGCTAA ATTCTACTGG ACGCTTATTA GACTCACTCA GAGTCACCAG ACCTGAAGCA
TGGCGTGGTG AGCGCAACTA TGAAGGAGGA GCTAACTAA
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| Protein sequence | MKTSARRQFQ CSKIAIVLSL ILLPLSAQSQ TLEQAVAHTL DTNPDLRVAF NRFKAREEQV
NQAIAGYMPT IDVSGGYGYE QTDSVSTRRR PNVGEVDSKG VAELNRGEFG VSLKQMLFDG
FYTSSEVDRY SFEASADQWA LLAAAEDMAL DVSKVYLNYL RTDQVLKLAE KNLNSHKDIY
DQIKQRTDSG LGSIADLSQI TGRLARANAN VISARNNLLD AKAQYIRIVE SAPADLILPV
PDAEMLPKDL SSGIIEAQEN HPILKSAAND IRAAENERSS VQSNYYPQVS LELNGNWNND
VGGEDGISGA GAFRSDVGGY SNDLMAMVRV KYNLFSGGKD LAREKETAYK LGEAKEIRQR
AQREVVEGVN LAWNAFEMLA PQKQYIRDHV VAAKDTQTAY AQQFNLGQRS LLDLLDTENE
LFEARKDYLQ AEYDEIIAKY RVLNSTGRLL DSLRVTRPEA WRGERNYEGG AN
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