Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal_3760 |
Symbol | |
ID | 4843908 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS155 |
Kingdom | Bacteria |
Replicon accession | NC_009052 |
Strand | - |
Start bp | 4414670 |
End bp | 4415284 |
Gene Length | 615 bp |
Protein Length | 204 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640121027 |
Product | HAD family hydrolase |
Protein accession | YP_001052103 |
Protein GI | 126175954 |
COG category | [R] General function prediction only |
COG ID | [COG0546] Predicted phosphatases |
TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGATCACTA GACTTAGCGA TTTAAAACTT AAGGATGTCC GTGGGGTCAT CTTCGATCTT GACGGCACTT TAGCGCATTC CAATCCCGAT TTTGCTGGTC TGCGGCGTGA GTTGGGGATT CATTCTGGTA CGGATATCTT GGCCCATGTG GATAGCCTGA GTGCGGGTGA AGCACAGGCT CAGGCGCTGG AAATCGTCCA TGAGTACGAG AGACAAAGCT CACTCAATGC CAGTTGGATT GATGGCGTGC GTGAGCTTAT CGAATGCCTA CGGGCTAAGT CGCTGCCCTT GGCTATTTTG ACCCGCAATA TGCCGGAAGC GGCGCAAATC ACTATCGATA AGCTTGGCAT AGATATCGAA CTAGTATTAA CGCGTTACGA CGCGCAGCCT AAGCCGCATC CCGAAGGTAT TCATCTTATT TGCCAGCAGT GGCAACTCGC CCCAGCAGAT ATCTTATATG TGGGCGATTA TTTGTTTGAT CTGCAAACTG CGCGTAATGC GGGTAGCCGC TGTGCTCTCT ATTGTCCTGA GGATATTCCC GATTATGCCC ACGACGCCGA CATGCTAGTG GCTTGCTACC ATAGCTTTAT CGAAGCGTGG ACAGTGGGTG ACTAA
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Protein sequence | MITRLSDLKL KDVRGVIFDL DGTLAHSNPD FAGLRRELGI HSGTDILAHV DSLSAGEAQA QALEIVHEYE RQSSLNASWI DGVRELIECL RAKSLPLAIL TRNMPEAAQI TIDKLGIDIE LVLTRYDAQP KPHPEGIHLI CQQWQLAPAD ILYVGDYLFD LQTARNAGSR CALYCPEDIP DYAHDADMLV ACYHSFIEAW TVGD
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