| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_3719 |
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| Symbol | |
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| ID | 4843359 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS155 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009052 |
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| Strand | - |
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| Start bp | 4348197 |
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| End bp | 4351268 |
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| Gene Length | 3072 bp |
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| Protein Length | 1023 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640120986 |
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| Product | HsdR family type I site-specific deoxyribonuclease |
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| Protein accession | YP_001052062 |
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| Protein GI | 126175913 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0610] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
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| TIGRFAM ID | [TIGR00348] type I site-specific deoxyribonuclease, HsdR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATATCAA TGAAAAATGA ACAACAAATT GAGAACGAGC TAATCACCAA ACTAGAAGAT
CTCAAATATA CCTACCGTCA CGATATTCGT AGTAAGGCTT CGCTTGAACA AAATTTTCGC
GAGAAATTCG AAGCACTAAA TCGTGTTCAT TTAACCAATA ATGAATTCAA GCGCTTACTG
CAAGAAATTA TTACCAGTGA TGTATTCAGC GCAGCGAAGA CGTTGCGTGA ACGAGGCTAT
TTTCAGCGTG AAGATGGCAC ACCATTACAT TACACCTTAG TGAATATAAA AGACTGGTGT
AAAAATGAAT TTGAAGTCAT TAACCAGTTA CGTATTAATC ACGATGATAG CCACCATCGC
TATGACGTGA TATTGCTGAT CAATGGCGTG CCAGTGGTGC AAATAGAACT TAAAAGTCAC
CAAATTGTTA CTCGCCGCGC GATGGAGCAA ATCGTTAACT ATAAAAACGA TGCAGGTAAC
GGATACAACA ACACACTAAT GTGCTTTATG CAGTTGTTTA TTGTTAGCAA TGAAAACCAA
ACCTATTATT TTGCTAATAA CCGCAATGAG CATTTTAGTT TTAATGCTGA TGAACGTTTT
TTGCCGATAT ATCAATTGGC TAATTATAAT AATAGGAAAA TCAATCATTT ACATGATTTT
TCTGATTTCT TTTTAGCTAA ATGCACGTTA GGTCAAATGA TCAGCCGTTA CATGGTGTTG
GTACAATCAG AACAAAAACT GTTGATGATG CGCCCATATC AAATATTTGC GGTTGAAGCC
ATAATCGACT GTATACATGA AAATCGTGGT AATGGTTATA TTTGGCACAC CACAGGCTCA
GGGAAAACCT TAACCTCGTT TAAAGCCTCT ACGTTGTTGA AAGACAACCC AGAAGTAGAT
AAATGCTTAT TTGTGGTTGA TCGTAAAGAC CTTGATCGCC AAACTCGCGA AGAATTTAAC
AAATTTCAAG ACGGCTGTGT AGAAGAAAAT ACTAATACTG AAACCTTAGT GCGGCGCATG
TTGTCGGAAG ACTATGCAGA TAAAGTCATC GTCACTACCA TTCAAAAGCT CGGCCTTGCA
CTGGATGAAA ACAGTAAGCG TAATCAAAGT AAACTCAAAG ACGGCCAACT AACGTTTAAA
GAGCGCCTAG AGCCATTACG CGATAAACGA GTTGTGTTTA TTTTTGATGA ATGCCATCGT
TCTCAGTTTG GCGAAAACCA CAAAGCTATT AAAAACTTTT TCCCCCGATC GCAGTTATTT
GGATTTACTG GTACCCCAAT TTTTGACGAT AACTCAAATT ACACTCAAAT AGACGGTACA
GTTGGTTCAT TCAAAACCAC GAAAGACATA TTTGAAAATG AATTGCACTC GTACACCATT
ACCAATGCTA TTGATGATAA AAACGTGTTG AGTTTTCACA TTGATTTTTT TGGCAAAAAC
AGCAAAAGTC CAGATGGCGA CTGCAAAGTG GATACCGTCA CGCCTCCTCC AGAGGCTGTA
GTCAAAGAAA TTTTAGCAAA ACATAACGCT GCAACCAATC AACGGCGTTT TAACGCAATT
CTTGCTACAG CTAAAATTAA TGATGCTATT CATTATTTTG AGCAATTCAA AATACAACAG
GCACAGAAGC AAGCCCTCGA TGACAGCTAT GTTCCGCTCA ATATTGCTTG CGTATTCTCA
CCACCCGCGC AACCATCAAA AAGTACCGAT GAAGCGCAAG CATGCAATGC AGATAAAAAC
GTCAAAGACA TAAAACAACT ACAAGAAGAC TTGCCGCAAG AACAGCTAGA CAACCAACAA
GAGCCAGAAC AAAAAAAGGC AGCCTTGGTC GCCATTATCA ACAGTTATAA CCAACAATTT
TGCACTAACC ACAACATTAA TGAATTTGAC TTGTACTACC AAGATGTACA ACAGCGTATT
AAAGATCAAA AATACAGCAA TGCAGACTAC CCCCATAAAA ACAAAATTGA CATCATCATA
GTGGTTGATA TGTTGCTCAC TGGGTTTGAC TCTAAATATC TCAACACCTT ATATGTCGAT
AAAAACCTTA AATATCATGG CTTAATTCAA GCGTTTTCAC GAACAAATCG AGTGCTCAAC
GACAGCAAGC CTTGGGGGAA TATTCTAGAT TTTCGCGGTC AAGAAAAACA AGTTAATCAA
GCGATTGAGC TATTTTCAGG GGCAGCTAAA GATCGCGCTA AAGAGATTTG GCTCGTAGAG
TCCGCCCCTG TTGTGGTTAA AAAATACCAA CAAGCTATTA CAGAGCTGCA AACCTTTATG
CAAAGTAAAG GCCTTGATTG CACGCCTTCG GCTGTAGCAA ATTTAAATGG CGATACAGCG
AAAGCCGAAT TTATTAATCA CTTTAAAGAA GTGCAAAAGC TTAAAACTCA AATTGAGCAA
TATACCGAGC TCGACGATGC GCAATTACAA ACCGTTGAAG CCGCCATGCC TATTGATAGT
CTTCGAGGTT TTAAAGGGGT TTACCTCGAA ACCGCCAAAG GCCTCAAACG TAAGCAAGAC
CAAAATAATG GTGAGTTAGA TAAAACTATT GAACAGCTCG AGTTTGAGTT TGTCTTATTT
GCCTCTGCAC TCATAGATTA CGACTACATC ATGGGCTTAA TTGCCCAGTC TACACAAGCG
GCAGGCCAAG GTGCCAGTAA ACACAAAATG ACCCGCCAAG AACTGATTGA TTTAATCAGT
TCACAGGCTA ATTTAATGGA AGAACGCGAC GACATTATTG CCTACATAGA ACACCTGCCA
GCAGGTGTTG CCTTGAATGT AGAGCAAATC AAAATCGGCT TCCAAAAGTT TAAGGCAGCT
AAAGCCGCGA CTGAATTAAA TCAAATGGCC ATAAACTATG ACCTCACCCC ACAAAGTTTA
AAAGACTTTG TTGATAATAT AATGAAGCAC ATGATTTTTG ACGGTGAACA ACTTAGCGAT
TTACTTGCCC CGCTTGATTT GGGCTGGAAA GCGCGTACCC AAAAAGAGCT CGCGTTAATG
GAAGACTTAA TCCCCTATTT ACACAAGCTC GCCCAAGGGC GGGAAATTTC AGGGCTTGCA
GCGTATGAAT AA
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| Protein sequence | MISMKNEQQI ENELITKLED LKYTYRHDIR SKASLEQNFR EKFEALNRVH LTNNEFKRLL
QEIITSDVFS AAKTLRERGY FQREDGTPLH YTLVNIKDWC KNEFEVINQL RINHDDSHHR
YDVILLINGV PVVQIELKSH QIVTRRAMEQ IVNYKNDAGN GYNNTLMCFM QLFIVSNENQ
TYYFANNRNE HFSFNADERF LPIYQLANYN NRKINHLHDF SDFFLAKCTL GQMISRYMVL
VQSEQKLLMM RPYQIFAVEA IIDCIHENRG NGYIWHTTGS GKTLTSFKAS TLLKDNPEVD
KCLFVVDRKD LDRQTREEFN KFQDGCVEEN TNTETLVRRM LSEDYADKVI VTTIQKLGLA
LDENSKRNQS KLKDGQLTFK ERLEPLRDKR VVFIFDECHR SQFGENHKAI KNFFPRSQLF
GFTGTPIFDD NSNYTQIDGT VGSFKTTKDI FENELHSYTI TNAIDDKNVL SFHIDFFGKN
SKSPDGDCKV DTVTPPPEAV VKEILAKHNA ATNQRRFNAI LATAKINDAI HYFEQFKIQQ
AQKQALDDSY VPLNIACVFS PPAQPSKSTD EAQACNADKN VKDIKQLQED LPQEQLDNQQ
EPEQKKAALV AIINSYNQQF CTNHNINEFD LYYQDVQQRI KDQKYSNADY PHKNKIDIII
VVDMLLTGFD SKYLNTLYVD KNLKYHGLIQ AFSRTNRVLN DSKPWGNILD FRGQEKQVNQ
AIELFSGAAK DRAKEIWLVE SAPVVVKKYQ QAITELQTFM QSKGLDCTPS AVANLNGDTA
KAEFINHFKE VQKLKTQIEQ YTELDDAQLQ TVEAAMPIDS LRGFKGVYLE TAKGLKRKQD
QNNGELDKTI EQLEFEFVLF ASALIDYDYI MGLIAQSTQA AGQGASKHKM TRQELIDLIS
SQANLMEERD DIIAYIEHLP AGVALNVEQI KIGFQKFKAA KAATELNQMA INYDLTPQSL
KDFVDNIMKH MIFDGEQLSD LLAPLDLGWK ARTQKELALM EDLIPYLHKL AQGREISGLA
AYE
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