| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_3534 |
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| Symbol | |
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| ID | 4841440 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS155 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009052 |
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| Strand | - |
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| Start bp | 4155446 |
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| End bp | 4156897 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640120803 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_001051880 |
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| Protein GI | 126175731 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00132321 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATACAA AAATATTTAA TCGACACTTT TCGCCTCGTA GCTGCGCGAT TGCTGTGGGC
ATGGCTTTAG GAATCGCCTT GCTGAGTGGC TGTGGCAGTT TCATGCGTTC AGACTTTGAA
CCGCCCGCAT TGGCGATTCC TGAACAGTGG CAAAACACCA CAGTGAACGA GCAAGTAAAG
GTCGATCCTT GGTGGCAGCA GTTTCATCAG CCTGAGCTCG ATAAGCTGGT TAGCCAAGTG
TTGAGCACCA ACAATGACTT AACGCTGGCG ACCTTAACCC TGCGTAAAGC GCGCTTGCAG
GCAGGGCTAA CGCGGGACGA TCTGTATCCG CAATTATCGG CCAATCTTGG TGCTTCGCGT
AATCAGCCAC TTGATGGTGG CGACGCGACT AAGAGTTATC AAGCCAACTT GTCTGTCAGT
TATGAGGTGG ATTTGTGGGG CAAAGTGTCA GCCAATATTG ACCAAGCCCA ATGGGCGGCG
CTGGCGAGCG CGGAAGATAG GGAAAGCACC ACCCAAAGCC TAGTGGCGAC CACAGCATCC
TTGTACTGGC AGATAGGTTA TTTAAATCAA CGGGTTGATT TAAGCCAAAA GAGCATAGCG
TACAGCAAAC AAACGTTAGA TTTAACCCAA AGGCAGTATG ATTCTGGGGC CGTGACGCAA
GTGAATGTGC TTGAAGCTCA GCGCAGTATG GCGGGACAAG AGGCGGCCCA TAGTCAGCTT
ATTCAGCAAT TAACTGTGGC TAAAAATGCC CTCGCGATAT TACTGAATCA GGCACCTGCA
GCTGTTCCTG CGCAGAGTTT AGCCTCAGGC GAAACTTGGG TTGAGATTAA ACAGCTCCCC
GATGTGGCGG TGCCGGACGT TAGCGTGGGT GTACCCGCAG ATTTATTAGT GAGACGCCCA
GATGTGAAGG CCTCCTTGTA TCAACTGCGC TCCGCCTTGG CGAGTAAAGA TGCGACCTAT
GCGAGTTATT TTCCAAGCCT GAGTTTAACC GGCGGTGTTG GGGAGTCGAC CTCTGAGTTA
AAAGAGTTGT TACGCAATCC CGTTGGCAGT TTAGGCGCAG GGCTAGTCTT GCCCTTTTTG
CAGTGGAATC AAATGCAAAT CAATAATGAC ATTGCCGATA TCGATTATCA AACCGCAGTG
GTTAATTATC GCAAGACGCT TTATTCCGCC TTTGAAGATG TCGATAACGC GATTTCGGCT
AAGCAGCAAT ATCGTTATCA AGGGGAGAAG TTGGCGCAAC AATTTAGCGC CGCGGCAGCC
GTTGAAGCCA TTTATGAGAG TCAGTACCGC AATGGCGCTA TCGGTATTCA GAATTGGATT
GATGCCCAAG AGAATCGTCG CAGCGCCGAG GCGGCTTTGC TCGAGAATCG TTACAACCAA
CTCACCGCCC AAGCGACGCT TTATCAAGCC CTTGGCGGCA GCGATATCGC CCCGCCTTTG
GCAAAGGAAT AG
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| Protein sequence | MNTKIFNRHF SPRSCAIAVG MALGIALLSG CGSFMRSDFE PPALAIPEQW QNTTVNEQVK
VDPWWQQFHQ PELDKLVSQV LSTNNDLTLA TLTLRKARLQ AGLTRDDLYP QLSANLGASR
NQPLDGGDAT KSYQANLSVS YEVDLWGKVS ANIDQAQWAA LASAEDREST TQSLVATTAS
LYWQIGYLNQ RVDLSQKSIA YSKQTLDLTQ RQYDSGAVTQ VNVLEAQRSM AGQEAAHSQL
IQQLTVAKNA LAILLNQAPA AVPAQSLASG ETWVEIKQLP DVAVPDVSVG VPADLLVRRP
DVKASLYQLR SALASKDATY ASYFPSLSLT GGVGESTSEL KELLRNPVGS LGAGLVLPFL
QWNQMQINND IADIDYQTAV VNYRKTLYSA FEDVDNAISA KQQYRYQGEK LAQQFSAAAA
VEAIYESQYR NGAIGIQNWI DAQENRRSAE AALLENRYNQ LTAQATLYQA LGGSDIAPPL
AKE
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