| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_3406 |
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| Symbol | |
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| ID | 4842260 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS155 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009052 |
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| Strand | - |
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| Start bp | 3989039 |
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| End bp | 3990763 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640120671 |
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| Product | TrkA domain-containing protein |
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| Protein accession | YP_001051752 |
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| Protein GI | 126175603 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0471] Di- and tricarboxylate transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGTGACT TGTGGCTGTT AGCGATTATT TTGTTAGGTC TTGTGGCTGG CTTAATTAGC
GGCCGTATCA ATCCCGCGGT ATTGTTTTTA TTTGCATTTT TGCTCTGTTA TTTGCTTGGC
ATGGTTGCGC TCGATACCGC ATTAACAAGC TTTACAAATA TTGGCTTAGT CACGCTTGTT
CTGTTGGTAT TGGCCGCGAC GGCGTTAGAA AAAACGTCCC TGCTGGGAAA GTTGAGTCAA
GTCATAGGCA ATAGTTCTTT GCCTATGACA ATGGCAAAGC TTGGGCTATC GACCGCCTTG
CTGTCGTCCT TTACCAATAA CACTGCGGTG GTGGCGTCGC TTATCGGGGT TGTGCGCCGT
AATCAAGCAC ACGCACCCGC TAAGTTATTG TTGCCGTTAA ATTATGCGGC AATTTTAGGT
GGCACACTGA CCCTGATTGG TACCTCGACC AACTTGATTG TGAACTCCTT TGTGGAGAAC
GCCGGCTTAC CCGCCTTAGG ATTCTTCGAG TTCACGCCGG TCGCGGTTGT GATCGTCGTC
GCTGGCATCT TGTTATTGAT CTTACTAGCG AACATTCTGC CCGACAGACG GGAAGAGTCG
GGTGAAGAGG CGCTGCCTTA CTTGCTCGAA GCCCATGTGG CAAAAGGCTC ATCCTTAGTC
GGTCGCAGTG TGGTGGATAA CAAACTCAGG GCGCTGAAGA AGTTATATCT GGTTGAACTA
GAACGCAGCG GCATTTGTAT TTGCCCTGTG CCGCCCCAGT TAGTGCTGCA AGCGGACGAC
GTGCTGCGCT TCAGTGGCGC GGTGGAATCG GTTGAGTTAT TGCATCAATT CGATGGATTA
GATTGGTTTG GTAAGCATCA AGCTAAGGGA CAAAATTTAG TTGAAGCTGT GCTCGCGCCA
TCATCTAGTT TAGTCGGCAG TTCGTTGAAA GAGTCACGTT TTCGTGAACA GTTCGATGCG
GCCGTGATGG CGATCCGCCG CGGCAATCAT CCGCTGAAGG GCGGGCTTGG CGACATTATT
CTGCAACCCG GTGATGTGTT GTTATTGACG CCAGGCGATG GTTTCAGCAA TAGCGCAAAA
TTGAGTTCAG AATTTGCGGC GATCAGCGGC TTAGATTTGA ATGTGCGGTT AGACAGTCGC
CGTGGTCGTT GGGTATTGCT CGGCTTTGCG GTCACGATCG TTTTGAGTGT CACCGGTGTA
TTGCCATTGG CTAAAGGTTT AGTGCTCCTG CTGCTGAGTT ATTTTGTTAT TGGCGCTGTC
ACTTTGGCTG AGCTTAAACG CCGTTTTCCA TTGGAATTAG TGGTGATAGT GGGGAGTGCG
TTAGGGCTCG CTAACTTGAT GATGAGCACC GGCCTTGCGG ACAGTTTAGC CCAAGGATTA
CTCTCGGTTA TCAATGGTTA TGGGGTGTTT GGCGCGTTTG TTGGTGTGTA TTTTATGACC
TTGTTGTTGA CTGAATTGGT CACCAACAAC GCCGCCGCAG CGTTGGCTTT CCCTATCGCC
TACGCAATTG CGCTTAATTA CGGTGTCGAT GCAAGACCCT TTATTATGGC CGTGGTCTTT
GGTGCCAGCG CGAGCTTTAT TTCACCCTAC GGCTATCAAA CCAATTTGAT GGTATTTAAC
GCGGGTAATT ATCGCTTCAG TGACTTCGTC CGCCTAGGAT TGCCGTTATC TGTGCTGTAT
TCCCTGATAG TGATATTTAT GGTGCCGATC ATCTTTCCTT TTTAG
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| Protein sequence | MSDLWLLAII LLGLVAGLIS GRINPAVLFL FAFLLCYLLG MVALDTALTS FTNIGLVTLV
LLVLAATALE KTSLLGKLSQ VIGNSSLPMT MAKLGLSTAL LSSFTNNTAV VASLIGVVRR
NQAHAPAKLL LPLNYAAILG GTLTLIGTST NLIVNSFVEN AGLPALGFFE FTPVAVVIVV
AGILLLILLA NILPDRREES GEEALPYLLE AHVAKGSSLV GRSVVDNKLR ALKKLYLVEL
ERSGICICPV PPQLVLQADD VLRFSGAVES VELLHQFDGL DWFGKHQAKG QNLVEAVLAP
SSSLVGSSLK ESRFREQFDA AVMAIRRGNH PLKGGLGDII LQPGDVLLLT PGDGFSNSAK
LSSEFAAISG LDLNVRLDSR RGRWVLLGFA VTIVLSVTGV LPLAKGLVLL LLSYFVIGAV
TLAELKRRFP LELVVIVGSA LGLANLMMST GLADSLAQGL LSVINGYGVF GAFVGVYFMT
LLLTELVTNN AAAALAFPIA YAIALNYGVD ARPFIMAVVF GASASFISPY GYQTNLMVFN
AGNYRFSDFV RLGLPLSVLY SLIVIFMVPI IFPF
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