| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_3385 |
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| Symbol | |
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| ID | 4842488 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS155 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009052 |
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| Strand | - |
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| Start bp | 3965278 |
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| End bp | 3966903 |
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| Gene Length | 1626 bp |
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| Protein Length | 541 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640120650 |
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| Product | rhomboid family protein |
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| Protein accession | YP_001051731 |
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| Protein GI | 126175582 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGATGTAC TGCTAAAAAA ACTTCAACTG ATCTATTTTC CCTTCTTATT CACGAGCCTG
TTATTTATCT CTGGCTATAG CTTAATCCAT TGGCTGTTGT TGATTAAATT TGAGTTTTTT
AGCATAGATG AAGATCTGGT CAATTTTGGA TTACCGCTGA TACTGTCATG GCTCTTGTTG
CTTGTTTTTC TGAGGCCAAG GCTAAAACTG CTGAAGTTTG TTAAGGATAA TTCACGCTTT
TTCTATCTAC TTTTCGCCGT GCAGCTCGTG GCTGTGCCTT GTATTATTGC GCAGGTATAT
CTTAAAACAG CAACGGGTCA GTTAACCCAA TTAGCATCGA TCCAAGAATT GTATCTACAT
AAAAAGACAC AGTATTACCA GTTACAGCAC GCTTATATTG ATAAGGCGCA AATTGGTGTG
CAGCGAAATA TTGAGGTTAC AGGAAAAGGT AACAGTCACT TGAATATGAC GCTCTATATT
GCGATGCCGA TTTTTGCGAG TGGCGCCGAT CGTCGCCGAA CTTCTGTCTT AGCTTGGTAT
GGCAAAATTT ATCAGCAGGA GATCAGTAAT AGGCTCGAAC CCGATGAAAA AGAACAAGCA
TACAAGGCGT TTTTGACTCA ATCCCAACGT GAGTTTGATA AGTTTGACCC GCAAACGTTT
GTTTACCTTG AACGATTAGC CCCTTCATCT CTCCAGAGAG ACTTACTTAG CGCAGCGGAA
AAAAGTCCGC TTTATCAAGC TGAATACCCA ACGATTTTTA TGCCGAAGTT TGAGCCATTT
GAAGCCCGTA ATGGCAATAA ACTCGCTTGG ATGCTGATTT GGTTTGTTGC AGGTGCTTTA
GTCTGGTTTG TGCTCTTGCT ACGGGTGAAA CTGGATGAAG AAGCGCTTAA AGCTGACACA
GTTACAAAGC GTTTGAACCA TGCGGGCACA ATCGCCGAGC TTAACGATTT TTTTGAAATG
ATACGGCCCA AGCCGGGTTT TATTGCAACT CCTATTCTGA TGTATCTCAA TGTTTTAGTG
TTTATCCTTA TGGCATGGTC AAGCCAACAT TTTATTAATT TTCAGGGTAG TTTCATGCTC
GAATGGGGGG CTAACTTTCG ACCTAAAGTG CTTGCTGGTG AGTGGTGGCG CTTAATCACG
AGTACCTTTA TCCATGGCGG TTTAGCCCAC TTAGCGCTGA ATCTTTACGG CTTGTTTTTT
GTCGGCAGCT TTCTTGAACC TGTACTCGGT AAGTGGCGAC TATTTTTGGC GTATTTGATC
ACTGGGGTAT TGGCAAGTAT TGCCAGTATC TGTTGGTATG ATGCCACTGT GAGTGTCGGT
GCATCGGGCG CCATTATGGG GCTATTAGGA ATACTCGTGA TTTGGGCTTG GAAAAAGATT
TTCCCTGAGG ATATCAACTG GGTACTGAGT ATTAACTTGG CATTTTTTGT GACCATAAGT
CTAGTCGCAG GATTATTGGG TGGAGTGGAC AATGCTGCCC ATATTGGCGG ATTGTTGAGT
GGGTTAGGGG TTGGTTACCT TTCGCTGCGC TATGCTCGAG GTGCTCAGGG GGATCGAGGT
GCTCAGAGAG CTCGGAAGAT TGAGGGCCAT AGTCCAGCTA AAAAACGTAA GCCGAGACGC
AAATAA
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| Protein sequence | MDVLLKKLQL IYFPFLFTSL LFISGYSLIH WLLLIKFEFF SIDEDLVNFG LPLILSWLLL
LVFLRPRLKL LKFVKDNSRF FYLLFAVQLV AVPCIIAQVY LKTATGQLTQ LASIQELYLH
KKTQYYQLQH AYIDKAQIGV QRNIEVTGKG NSHLNMTLYI AMPIFASGAD RRRTSVLAWY
GKIYQQEISN RLEPDEKEQA YKAFLTQSQR EFDKFDPQTF VYLERLAPSS LQRDLLSAAE
KSPLYQAEYP TIFMPKFEPF EARNGNKLAW MLIWFVAGAL VWFVLLLRVK LDEEALKADT
VTKRLNHAGT IAELNDFFEM IRPKPGFIAT PILMYLNVLV FILMAWSSQH FINFQGSFML
EWGANFRPKV LAGEWWRLIT STFIHGGLAH LALNLYGLFF VGSFLEPVLG KWRLFLAYLI
TGVLASIASI CWYDATVSVG ASGAIMGLLG ILVIWAWKKI FPEDINWVLS INLAFFVTIS
LVAGLLGGVD NAAHIGGLLS GLGVGYLSLR YARGAQGDRG AQRARKIEGH SPAKKRKPRR
K
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