| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_3198 |
|---|
| Symbol | |
|---|
| ID | 4842026 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS155 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009052 |
|---|
| Strand | + |
|---|
| Start bp | 3744285 |
|---|
| End bp | 3745652 |
|---|
| Gene Length | 1368 bp |
|---|
| Protein Length | 455 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640120457 |
|---|
| Product | peptidase U32 |
|---|
| Protein accession | YP_001051548 |
|---|
| Protein GI | 126175399 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0826] Collagenase and related proteases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTAAAC CTGAGCTGCT GTCTCCAGCT GGAACCCTGA AAAACATGCG CTACGCCTTT
GCCTATGGTG CAGATGCCGT GTATGCCGGT CAGCCGAGAT ATAGCCTAAG GGTACGTAAC
AATGACTTCA AAATGGAAAA CCTTGCCACA GGCATACAAG AAGCCCATGC GCTGGGTAAA
AAGCTGTATG TTGTGAGCAA CATAGCACCC CACAATGCCA AGCTGAAAAC TTATATCAAG
GACATGGAAC CCGTAGTGGC GATGAAGCCA GACGCGCTGA TCATGTCCGA TCCGGGTTTA
ATCATGATGG TACGTGAAGC GTTTCCCGAT CAAGTGGTGC ATTTATCCGT ACAGGCGAAT
GCCATCAACT GGGCCTCGGT CAAGTTTTGG CAAACCCAAG GCATCAAGCG CGTGATCCTG
TCGCGCGAAC TGTCCTTAGA TGAAATCGAA GAAATTCGTC AACGCTGCCC AGATATAGAA
CTCGAAGTGT TTGTGCATGG CGCCCTGTGT ATGGCATATT CAGGTCGTTG TTTACTCTCG
GGTTATATCA ACAAACGCGA TCCAAACCAA GGCACTTGTA CTAATGCTTG TCGCTGGAAA
TACGACGTGC ATGAAGCGCA GCAAAACGAC AGCGGCGACA TCATTGCCAT GCCGAATGCA
GTACAAATCG AAACGCCGAC GACTTTAGGT GCAGGTGCGC CCACGGATCA AATCTACCTA
CTGCAGGAAG CCAATCGTCC CGGCGAATAC ATGCCAGCCT TTGAAGATGA GCATGGTACT
TATATCATGA ACTCTAAGGA CTTACGTGCG ATTCAACACG TTGAGCGCCT GACCAAAATG
GGCATAGACT CACTCAAAAT TGAAGGGCGC ACTAAGTCTT TTTATTATGT AGCCCGCACC
GCACAGTTGT ATCGCCGCGC GATTGAAGAT GCTTCATCGG GTAAAGATTT CGACCGCAGC
CTAATGAATC AATTAGAAGG CCTAGCCCAC CGTGGTTATA CTGAAGGCTT TTTGCGTCGC
CATGTGCATG ATGAATATCA AAATTATGAC TATGGCTACT CAGTCAGTGA CACCCAACAA
TTTGTGGGTG AACTGACGGG TAAGCGTAAC CTTGCAGGAC TGGCTGAAAT CGAAGTGAAG
AACAAATTTT CCGTTGGCGA CAGTGTCGAG CTGATGACGC CACAGGGCAA TATCAGTCTG
ACGATTGAAC AACTCGAAAA TCGCAAGGCT GAAGCGGTTG CAGCGGGCTT AGGTTCTGGG
CACACTGTGT ATCTGCCCGT GCCAAAAGAA GTCGATTTGA GCCACGGTAT TTTGCTGCGT
AACCTGCCCC AAGGTCAGGA TACGCGCAAC CCACATGAAC TAGGTTAA
|
|---|
| Protein sequence | MFKPELLSPA GTLKNMRYAF AYGADAVYAG QPRYSLRVRN NDFKMENLAT GIQEAHALGK
KLYVVSNIAP HNAKLKTYIK DMEPVVAMKP DALIMSDPGL IMMVREAFPD QVVHLSVQAN
AINWASVKFW QTQGIKRVIL SRELSLDEIE EIRQRCPDIE LEVFVHGALC MAYSGRCLLS
GYINKRDPNQ GTCTNACRWK YDVHEAQQND SGDIIAMPNA VQIETPTTLG AGAPTDQIYL
LQEANRPGEY MPAFEDEHGT YIMNSKDLRA IQHVERLTKM GIDSLKIEGR TKSFYYVART
AQLYRRAIED ASSGKDFDRS LMNQLEGLAH RGYTEGFLRR HVHDEYQNYD YGYSVSDTQQ
FVGELTGKRN LAGLAEIEVK NKFSVGDSVE LMTPQGNISL TIEQLENRKA EAVAAGLGSG
HTVYLPVPKE VDLSHGILLR NLPQGQDTRN PHELG
|
|---|
| |