Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal_2742 |
Symbol | truA |
ID | 4845278 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS155 |
Kingdom | Bacteria |
Replicon accession | NC_009052 |
Strand | - |
Start bp | 3217046 |
End bp | 3217831 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640119978 |
Product | tRNA pseudouridine synthase A |
Protein accession | YP_001051098 |
Protein GI | 126174949 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0101] Pseudouridylate synthase |
TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0368715 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGGATTG CATTAGGTAT TGAATATGAC GGCAATGGTT ATTTTGGCTG GCAACGTCAG GCCGAAGTCG ATTCAGTACA AGCGCAATTA GAACGGGCGT TATCGATAGT GGCCAACGAG CCTATCGGCG TCTTCTGCGC TGGCCGTACC GATGCGGGCG TGCATGCCAC GGGCCAAGTG GTTCATTTTG AAACCCAAGC CATTCGTAAT GAAGGCGCAT GGACCTTAGG GGTGAATGCC AATTTACCTG ACAATATTGC CGTGCGTTGG GTTAAAGAAG TCGACGACAG TTTTCACGCG CGCTTTTCGG CCACCGCCAG ACGCTACCGT TACGTGATTT ATAATCACAG TTTTCGCCCT GGAATTTTAC GCCATGGTGT CAGCCATTAT CACGGCGATA TCGATGCTGA CAGAATGCAC CAAGCGGCGC AGGCACTCTT AGGTGAGCAG GATTTTACCA GCTTTCGCGC AGTCCAGTGT CAGTCGAAAA CGCCGTTTCG TAATGTACAT TGCGTTAATG TCACGCGCCA AGGCATGTAT GTGATTGTTG ATATCGCCGC CAACGCCTTT TTACATCACA TGGTGCGCAA TATCGTCGGT TCATTATTAG AAATCGGTTT AGGCAATCAG CCGCTGACGT GGATGGGTGA TTTGCTCGCG TTAAAAGACA GAAACCAAGC CGCAGCAACG GCTAAACCCC ATGGGCTTTA TTTAGTTGAT GTGACTTATC CAGAACAATA TCAATTGCCT AAGCTCGCCC TTGGGCCATT ATTCATGTTG GATTGA
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Protein sequence | MRIALGIEYD GNGYFGWQRQ AEVDSVQAQL ERALSIVANE PIGVFCAGRT DAGVHATGQV VHFETQAIRN EGAWTLGVNA NLPDNIAVRW VKEVDDSFHA RFSATARRYR YVIYNHSFRP GILRHGVSHY HGDIDADRMH QAAQALLGEQ DFTSFRAVQC QSKTPFRNVH CVNVTRQGMY VIVDIAANAF LHHMVRNIVG SLLEIGLGNQ PLTWMGDLLA LKDRNQAAAT AKPHGLYLVD VTYPEQYQLP KLALGPLFML D
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