Gene Sbal_2653 details

Gene Information

• Locus tag: Sbal_2653
• ID: 4843621
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella baltica OS155
• Kingdom: Bacteria
• Replicon accession: NC_009052
• Strand: -
• Start bp: 3108900
• End bp: 3110846
• Gene Length: 1947 bp
• Protein Length: 648 aa
• Translation table: 11
• GC content: 37%
• IMG OID: 640119894
• Product: DNA ligase (NAD(+))
• Protein accession: YP_001051014
• Protein GI: 126174865
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II)
• TIGRFAM ID: [TIGR00575] DNA ligase, NAD-dependent

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.869287
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAGAAT TTAAGTTTAA TGATGAGCAA CTCTCAACAA TACAAGAGCT AGAAGTAGAT 
ATTGATTTAA AAAAATTAGA AATTGCTATT AGTAAAGAAA GCATTGATGA ACTTAGCGAA 
GATGAATTGC TAGCTTTACT TAAGGTAACC AACGCTTTAT ATCGTTCAGG TTTTCCAGTA 
ATTGAAGATA TCCTTTATGA CTCTTTTTGG AATAAATTTG CTCTAAACCA TCCAAATCAT 
CCATTCATTA CTTCGGTAGA AACTGAAGTC TTGAACCTTG GTAAAACAGT AGCTCTACCT 
CAAAAGATGT TGTCAACTGA TAAGGCATAT TCAAAAGAGG AAATTAAGAA GTGGTTAGAT 
AGAATTCTAA AAGCTGCTGA AGAATTAGAT ATTGATACAA ACGAAATCGA AATTAGGATT 
ACTCCAAAGC TTGATGGTTA TGCTGCTTTT GACGACGGAG AAAGACTCTA TACACGTGGT 
GACGGCGTAA AAGGTCAAGA TGTATCAAGA GCTTTCGAAC GTGGTTTAAA AGTAGTAAGA 
AATAGTGAGA GAGGCTTAGG CGCTGGTGAG ATAGTCATCA ATAAAGCTTA TTTTGAAAAA 
AAGCTTAGTC AGTACTTCGA AAATTCTCGA AACATTCAAG CTGCTATCAT TGCTGAGAAA 
AACGTTGATG AGAGAGTTCT TGAGGCAATA AAAGAAGGTG CTTGTGTTTT TCATCCATTT 
GCTGTGCTTC CTAATTGGAC GGGTAATTAT CAGGATTTGA TGACGGATTT TGATGGCATT 
ATTGAGCAAG TATGGAATTC TGTCGAGTAT GACGTAGATG GTGTGATTTT GGAGGCCACA 
GACACTCGCA TAAAGGAGCA TATGGGAGCT AATAGAAAGT TCCATCGTTG GCAAATAGCA 
TTCAAGATTA ATGATGAAGT TGCTGAAGTA GAAGTTATCA GTGTTACTCC ACAAACTTCA 
AGAACAGGTA GAGTAACACC AGTTGCTGAA TTAGTGCCAA CTAGAATTAG TGGCGCTATG 
ATTAGCCGAG TTACAGTGCA CCATTACAAT ATGGTTAAAA TCAATGGTGT AGGCCCTGGC 
GCGATAGTTC AAATAGTTAG AAGTGGCTTG GTTATCCCTA AAATAGAAAA AGTTATAAAG 
CCCGTAGACC CTCAAATGCC AGAATTATGC CCTAGTTGTA AGTCTCATCT TCTATGGGAA 
TCTGATCACT TGGTATGTCC AAATAAGAGT GACTGTCCTG CACAGACAGA GAACACGCTT 
GTGCACTTTT TTAAAACACT AGCTAATAAT GACGGTTTTG GCCCTAAGAA TATCGAAAAA 
CTAGCAAATC TCGGAGTTAA GCATATCCAT CAAATGTATG ATTTGAAACC GCATCAGTTT 
GCGATGTATG GTTTTGGTGA GAAGACATCT AAGAACCTAT ATGATCAGCT ACAAGCAAGT 
AAAAATATTG AAATTGAAGA CTGGCGTTTC CTTTCTGCAT TTGGTGTGAG TCGTTTGGGG 
GGAGGTAATT GCGAGAAATT GCTTCAGCAT TACTCATTAC GAGAACTCTT TGAAGCGACC 
GTAGAAGATA TCGCCGAGTT AAATGGGTTC GCAAGAGTTA GTGCAGAAGC CATTGTTAAA 
GGTCTAGCTA ACATTAAAGA AGAATTTTTT AAAGTTTATG ACTTGGGATT TAATTTAAGT 
ATCACTCCTA AGCAGTCCGA GCTAGAAAGT TTAGCTTCAC CGCTTACTGG TAAAATAGTT 
GTTTTCACTG GAAAAATGCT TCAGGGAAAA CGGAGTGACA TGGAAAAGCA TGCTAAAGCA 
CTAGGGGCGA AAGTAGGTAC ATCTGTGACC AGTAATACAA CCTATCTGAT TGCTGGATTG 
AAAGTTGGTG AAACCAAAAT CAATGATGCA AAAGAGAAAG GAGTGAAAGT TTTATCTGAG 
CAGGAATATT TAGATTTAAT TAGTTAA 

 

Protein sequence

MKEFKFNDEQ LSTIQELEVD IDLKKLEIAI SKESIDELSE DELLALLKVT NALYRSGFPV 
IEDILYDSFW NKFALNHPNH PFITSVETEV LNLGKTVALP QKMLSTDKAY SKEEIKKWLD 
RILKAAEELD IDTNEIEIRI TPKLDGYAAF DDGERLYTRG DGVKGQDVSR AFERGLKVVR 
NSERGLGAGE IVINKAYFEK KLSQYFENSR NIQAAIIAEK NVDERVLEAI KEGACVFHPF 
AVLPNWTGNY QDLMTDFDGI IEQVWNSVEY DVDGVILEAT DTRIKEHMGA NRKFHRWQIA 
FKINDEVAEV EVISVTPQTS RTGRVTPVAE LVPTRISGAM ISRVTVHHYN MVKINGVGPG 
AIVQIVRSGL VIPKIEKVIK PVDPQMPELC PSCKSHLLWE SDHLVCPNKS DCPAQTENTL 
VHFFKTLANN DGFGPKNIEK LANLGVKHIH QMYDLKPHQF AMYGFGEKTS KNLYDQLQAS 
KNIEIEDWRF LSAFGVSRLG GGNCEKLLQH YSLRELFEAT VEDIAELNGF ARVSAEAIVK 
GLANIKEEFF KVYDLGFNLS ITPKQSELES LASPLTGKIV VFTGKMLQGK RSDMEKHAKA 
LGAKVGTSVT SNTTYLIAGL KVGETKINDA KEKGVKVLSE QEYLDLIS