| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_2455 |
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| Symbol | yebU |
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| ID | 4843875 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS155 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009052 |
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| Strand | + |
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| Start bp | 2868340 |
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| End bp | 2869857 |
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| Gene Length | 1518 bp |
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| Protein Length | 505 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640119678 |
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| Product | rRNA (cytosine-C(5)-)-methyltransferase RsmF |
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| Protein accession | YP_001050817 |
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| Protein GI | 126174668 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
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| TIGRFAM ID | [TIGR00446] NOL1/NOP2/sun family putative RNA methylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATATACT CGCGCCAGTT GATACACAGT CTATTTTCCT ATGGTTCAAT GAAATCAATG
GTTCAATTAA ATCAAAATTT TATCGATACA ATCACCCAAG AACTCCCCGC CCATTTATCC
ATGGACGAGT TTATTGCCGC CTGCGACAAG CCGCTTAGAC GTTCAATTCG GGTCAATACC
TTAAAAATCA GCAGCGACGA CTTTAAGACT CTGATGCAAC CTAAGGGCTG GACGTTTGAT
CCTATTCCTT GGTGTGAAGA CGGATTTTGG ATCAGCTACG ATGAAGAAGA ACAACTCGGC
AATGCCTTAG AGCACATTCA GGGCTTATTC TACATTCAAG AAGCCAGCTC TATGTTGCCG
CCGACCGCAC TTTTTACGCC TAGTGCATTT ACGACTAGTG CAAAGTGGCA GTGCGTACTC
GATCTCGCCT CTGCGCCGGG TTCAAAAACC ACGCAAATGG CCGCATTGAT GCAAAACCAA
GGTTTATTGG TAGCGAATGA GTATTCGGCG AGCCGCGTGA AAGTATTGCA CGCCAATGTG
CTGCGCATGG GCGCAAGTCA CTGTGCTCTC ACCCATTTCG ATGGCCGTGT GTTTGGCGAA
TACCTGTACG AAAGTTTCGA TGCAGTGCTC ATTGATGCGC CCTGTGGCGG CGAAGGCACA
GTGCGTAAAG ATGCCGATGC GCTAAAACAC TGGAGCCTTG ACGATGTGTT GGCCATTAGT
GAAACCCAAA AAGCCTTAAT CGAATCAGCG TTTCTCGCCC TGAAACCCGG CGGCAGTTTG
GTCTACTCAA CCTGCACCTT AAACCGCCTC GAAAACCAAG GCGTGTGCGA GTATTTAAAG
CAAGTCTACG GCGATGCCGT GCAATTTGAA TCCTTAAGTG ATTTATTTGA TGGCGCTGAT
CGAGCCACGA CAGCCGAAGG CTTCTTGCAT GTCTGGCCGC AGATTTACGA CAGTGAAGGT
TTCTTTGTCG CTAAATTGAC AAAAACTGCC TCTGTGCCGC GATTACTGCC TGAGCCTAAA
CTGCAGAAAA ACTTCCCCTT CACGACCGCA TCAGCGAAAC AAGCTCAAGG GATCAAAGAC
TATTTTCAGC AGGATTTAGG TATCAGCTTA CCGGACGAAC TCATCATGGT TCGCGATGAT
GAATTCTGGC TATTTCCCCA TGAATTCAAC GCTTTTATCG GCCGTATGCG CTTTCAGCGT
ATTGGCATTA AACTCGCCGA TAACAGTAAG CACGGGTTTA AAGTCCGCCA TGAAGCGATT
ATTGCTTTAG CGGGAAAACA ACTTAGCCCA ACGGCAAAAA CGGTCGATGT GAGCGATGTT
GAAGCTAAAG AGTATTTAAT GGGGCGAGAT ATTCCCTTAG CCACCGCAGG CAAAGCCCAA
GGTGAAGTGA TCGTCTGTTA TGGCGGCGCG CCATTAGGCA TGGCGAAACA TTTAGGCAAT
AAGTTAAAAA ACAACCTGCC CAGAGACTTA GTGAAAGATA AAGTGTTATT GCTACCAGAA
CAGACAAAAT CGTTATAG
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| Protein sequence | MIYSRQLIHS LFSYGSMKSM VQLNQNFIDT ITQELPAHLS MDEFIAACDK PLRRSIRVNT
LKISSDDFKT LMQPKGWTFD PIPWCEDGFW ISYDEEEQLG NALEHIQGLF YIQEASSMLP
PTALFTPSAF TTSAKWQCVL DLASAPGSKT TQMAALMQNQ GLLVANEYSA SRVKVLHANV
LRMGASHCAL THFDGRVFGE YLYESFDAVL IDAPCGGEGT VRKDADALKH WSLDDVLAIS
ETQKALIESA FLALKPGGSL VYSTCTLNRL ENQGVCEYLK QVYGDAVQFE SLSDLFDGAD
RATTAEGFLH VWPQIYDSEG FFVAKLTKTA SVPRLLPEPK LQKNFPFTTA SAKQAQGIKD
YFQQDLGISL PDELIMVRDD EFWLFPHEFN AFIGRMRFQR IGIKLADNSK HGFKVRHEAI
IALAGKQLSP TAKTVDVSDV EAKEYLMGRD IPLATAGKAQ GEVIVCYGGA PLGMAKHLGN
KLKNNLPRDL VKDKVLLLPE QTKSL
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