Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal_2256 |
Symbol | |
ID | 4843658 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS155 |
Kingdom | Bacteria |
Replicon accession | NC_009052 |
Strand | + |
Start bp | 2609992 |
End bp | 2610555 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640119478 |
Product | rhomboid family protein |
Protein accession | YP_001050621 |
Protein GI | 126174472 |
COG category | [R] General function prediction only |
COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.18089 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGTCTGA TATGTGCGGG TTTGTATGTC GCAGGCTTAG CCAGTCCTGC TGTCGACAAC CTGCTCGCCT ATCGCCGCAG TGCTATTGCT GATGGTGAAT GGTGGCGCTT AATCAGCGGT AATTTATTGC ACACGAATCA GTGGCACCTG TTGATGAATC TTGCGGGTCT GTGGGTTGTG CTGTTTTTGC ATCATTTCCA CTACCATCTC AAAGGCTTAA GCGCGCTATT CCTTGTGCTA TGTCTACTCG AAGGCATAGG CTTATATTTG GGCTACCCGC AATTGCTCGG TTATGTCGGC TTAAGCGGTA TGTTGCATGG CTTATTCGCC TTCGGCGCGG TTCAGGATAT TGTCCGCAAG CTGCGCTCAG GCTATCTGCT GTTACTTGGC GTTATCATCA AGGTTGGCCA CGAACAGCTT TATGGCGCCA GCAATGATGT CACCGCCATG ATAGGCGCGC GCGTGGCAAC CGAGGCGCAT TTGGTCGGTT TAATCTGTGG GCTGATTTGT GCTTTAGCGG TATTCATCAA GCTAAAGTTT CGCCACGTAA AAGTCTCTGC GTAA
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Protein sequence | MSLICAGLYV AGLASPAVDN LLAYRRSAIA DGEWWRLISG NLLHTNQWHL LMNLAGLWVV LFLHHFHYHL KGLSALFLVL CLLEGIGLYL GYPQLLGYVG LSGMLHGLFA FGAVQDIVRK LRSGYLLLLG VIIKVGHEQL YGASNDVTAM IGARVATEAH LVGLICGLIC ALAVFIKLKF RHVKVSA
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