| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_2145 |
|---|
| Symbol | |
|---|
| ID | 4844553 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS155 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009052 |
|---|
| Strand | + |
|---|
| Start bp | 2490847 |
|---|
| End bp | 2491470 |
|---|
| Gene Length | 624 bp |
|---|
| Protein Length | 207 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640119361 |
|---|
| Product | riboflavin synthase subunit alpha |
|---|
| Protein accession | YP_001050511 |
|---|
| Protein GI | 126174362 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0307] Riboflavin synthase alpha chain |
|---|
| TIGRFAM ID | [TIGR00187] riboflavin synthase, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0110513 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTACAG GTATAGTTCA AGCCACCTGC GAGGTGGTTG CAATACATAA GAAAGATGGC
CTAAATACCC TTGAGGTAGC GTTCGAACCT GATTTGCATG AGGGACTTGC GATTGGTGCA
AGTGTGGCAA ATAACGGGGT ATGTCTTACT GTGACTCAGG TCGTTGATGA TATGGTATTT
TTCGACGTAG TGGAAGAGAC CTTGCGACTG ACGAATCTGG CTAATTTGTC TATAGGTCAA
AGCGTTAATG TTGAGCGTTC GTTAACTTTT GGTAGTGAGA TTGGTGGTCA CATTCTCTCT
GGCCATATTC ATACCAAGGC TAAAGTCGTC GATATTAGCC ATACAGAACA GCATTATGAT
CTGACACTGG GCATTGAATC TAAATGGATG GATTACATTT TTTATAAAGG TTTTGTTGGC
GTTAACGGCT GCAGCTTAAC AGTAGGCGAG GTGAGTGACT CCGGCTTTAA GTTGCACTTA
ATTCCTGAAA CCCTAAAGCT GACCAATTTA AGTCAGTATA AAGTGGGTGA TGAACTCAAT
ATTGAGATCG ACAGCCAAAC GCAAGTTATC GTCGACACTG TCGAGCGCGT GCTGGCCAGA
CGTTTTAACG AACAAGCCCG TTAG
|
|---|
| Protein sequence | MFTGIVQATC EVVAIHKKDG LNTLEVAFEP DLHEGLAIGA SVANNGVCLT VTQVVDDMVF
FDVVEETLRL TNLANLSIGQ SVNVERSLTF GSEIGGHILS GHIHTKAKVV DISHTEQHYD
LTLGIESKWM DYIFYKGFVG VNGCSLTVGE VSDSGFKLHL IPETLKLTNL SQYKVGDELN
IEIDSQTQVI VDTVERVLAR RFNEQAR
|
|---|
| |