| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_2014 |
|---|
| Symbol | |
|---|
| ID | 4845323 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS155 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009052 |
|---|
| Strand | + |
|---|
| Start bp | 2335977 |
|---|
| End bp | 2337158 |
|---|
| Gene Length | 1182 bp |
|---|
| Protein Length | 393 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640119233 |
|---|
| Product | phosphate-selective porin O and P |
|---|
| Protein accession | YP_001050385 |
|---|
| Protein GI | 126174236 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR03304] outer membrane insertion C-terminal signal |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.637056 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAA CACTACTTGC TACTGCGCTA TTGGGCCTCT TTGCTAGCCA TCAGGCGCTC
GCCACGGATG AAACACAAGA ACTGCGTAAA GTAATTGAGC AGCAACAGCA AGTGCTGCAG
GGTCTTGAAA AACGCTTAGA AGAAACTGAA AAACGCGTAG AAAAAACCGC CGATGCCGTT
GAAGAAACTG GCTCAAGTAA GAGTGCAACG ACTATTGGTG GTTATGGCGA ACTGCACTAC
AACAACATTT CAGACAACAT TAAAGGCAAA GACAAAAAAG AATTCGATTT CCATCGTTTT
GTGTTGTTCG TTGGCCATGA ATTTACTGAG AAAACCCGTT TTTTCTCTGA GCTAGAAGTG
GAACATGCAT TGGCTGGCGA AGGTAAAAAG GGGGAAGTCG AGATAGAACA AGCCTATATC
GAGCATGATT TTAACCAGAG CTTCACGGGT AAAGCGGGTT TATTCCTGAT GCCTGTCGGT
ATCATCAACG AAACCCACGA GCCACCTGCA TTTTACGGTG TTGAGCGTAA TCCAGTTGAA
GCTGACATCA TCCCTGCTAC TTGGTGGGAG GCGGGTTTAG CGTTAAATAT TAAAGCGGCA
CCTGGCCTTG CATTTGATAC CGCAGTGACT AGCGGTCTTG CTGTTGCCAC AACGGGCGAC
AAAGCATTTA ATATTCGTAG CGGTCGCCAA AAAGTATCTA ACGCTAAGGG TGAAGATTTA
GCCTATACCG CCCGCGTGAA ATACACGGCT GTGCCCGGTT TAGAGCTGGC TGCTTCTGCA
CAATATCAAT CTGATTTAAC CCAAGGGGCT GCGGATGTCG ATACGGCATC GGCCACACTG
TTAACCGCGC ACGCTATCTA CAGCATTCAA AACTTCACCA TTAAAGCACT TTATGCTCAA
TGGGGTATCG ATGGCAAAGA GGCAGAAGCC CTAGGACAAG ATAAGCAGAA AGGCTATTAC
ATTGAGCCTT CATATCGCTT CAACGAAAGC TTTGGTGTCT TTGCCCGTTA CAATGCGTGG
GATAACAAGG CTGGCAATGA TGTTGACACC GAAATCACCC AAACTAATAT TGGTGTGAAT
TACTGGTTAC ATGAAAACGT GGTATTTAAA GCCGATTATG AAAAAGCGGG CGGTGCTAAA
GACGCCGACG GTTTCAACTT AGGCGTGGGT TACCAGTTCT AA
|
|---|
| Protein sequence | MKKTLLATAL LGLFASHQAL ATDETQELRK VIEQQQQVLQ GLEKRLEETE KRVEKTADAV
EETGSSKSAT TIGGYGELHY NNISDNIKGK DKKEFDFHRF VLFVGHEFTE KTRFFSELEV
EHALAGEGKK GEVEIEQAYI EHDFNQSFTG KAGLFLMPVG IINETHEPPA FYGVERNPVE
ADIIPATWWE AGLALNIKAA PGLAFDTAVT SGLAVATTGD KAFNIRSGRQ KVSNAKGEDL
AYTARVKYTA VPGLELAASA QYQSDLTQGA ADVDTASATL LTAHAIYSIQ NFTIKALYAQ
WGIDGKEAEA LGQDKQKGYY IEPSYRFNES FGVFARYNAW DNKAGNDVDT EITQTNIGVN
YWLHENVVFK ADYEKAGGAK DADGFNLGVG YQF
|
|---|
| |