| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_1947 |
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| Symbol | |
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| ID | 4842235 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS155 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009052 |
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| Strand | + |
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| Start bp | 2263271 |
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| End bp | 2264476 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640119167 |
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| Product | YscD/HrpQ family type III secretion apparatus protein |
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| Protein accession | YP_001050320 |
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| Protein GI | 126174171 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02500] type III secretion apparatus protein, YscD/HrpQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTTCAG GATACAAGCT CTTATGGTTA AACGGTCCAT TGCAAGGACG AGAGTTATCT
TTGCCTCTTG GCAGCTTAAG CATAGGACCC GATGGTGATG TGTTAGCCAC ACTCGAACAC
GCTGAACAAG TGGATTTATT GATCGATGAA ATGGGGGTTC GGCTGCAGTC TTGGGTACCG
ACTTGGATAG CAGGACAGCT TGTTAGCGAA GTCAACATGT TGCCATTGGG GCAAGCAATT
GAACTCGCAG GTGTGGGTAT CCTCTTAGGT CACAGCAGCG ATGAATTAAA GCAACAGGCA
ATGCCATCAC ATTGTCAAAC AAAGGCAAAG AAGTCGTGGT GGTTACTGGC GACAGTTTCA
ATGCTCTCTA TGGTGCTATT AACGACAGTG TTATTAGCGC CTGCGAAGAT GCCTATCGTC
GAGTTGACAC AAGCACAATG GTTATCGCAG CAGTTGCAGA CCGATGGTTT AAACGGAGTT
CAAGCTCATT GGTCAAAGGA TGGCGTGGTG ACGCTGAGCG GCTTTTGCCA AGATTCACAA
CGTATGGCGC GGTTTCTTGG TGACATCAAA GGACAAGGTA TTTTATTTAT AGAGCAGACC
ACTTGCGGCG ATCAGTTGAT ACGTAATGTC AAAGATGTCT TAGTCCAAAA TGGGTTTGCC
AATGCCCTTG TAACCCTAGC TAGTGAGCCT GGTAATGTCA TCATTTCGGG CGCGATTCAA
TCAGGGGAGC CCTGGGATAA AGCAGTGTCT AGCTTGAATA ACTTGCCCGG ACTCGTTAAT
TGGCAAGTTA GCAATCAGGT TGACAGTCAA CTCAAACCGC TCATCTGCGC GTTGCGAAAC
AAAAATTTAC TCGTCGGTCT CATGATAGAA AGGATCAATG ATGCCATTGT CATGACGGGT
AAAGTCAGTG AACAACAACA GCAACAGATC ATGGCTGTCG CGCAAGGATT AGAACCAACG
CATGCCAGTG GATTGAAATT AGTATTTCAA AATATTCCAG TACGAGACGA ACTTAATCAT
TTATTAAATG CTTCTGTGGT GACCTATGGT GGTAATGCAC AGTCTCCATT CATAGAGTTA
TCGAGTGGTG TTCGGTTATC AACAGGGAGC AAATTAGATA ATGGTTATGT CGTGGAGTAT
ATGAACATTC ATGGATTAGA TCTCAGTAGA GCCGGTGAGT TAATTCATGT ACCACTTATT
TTTTAG
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| Protein sequence | MSSGYKLLWL NGPLQGRELS LPLGSLSIGP DGDVLATLEH AEQVDLLIDE MGVRLQSWVP
TWIAGQLVSE VNMLPLGQAI ELAGVGILLG HSSDELKQQA MPSHCQTKAK KSWWLLATVS
MLSMVLLTTV LLAPAKMPIV ELTQAQWLSQ QLQTDGLNGV QAHWSKDGVV TLSGFCQDSQ
RMARFLGDIK GQGILFIEQT TCGDQLIRNV KDVLVQNGFA NALVTLASEP GNVIISGAIQ
SGEPWDKAVS SLNNLPGLVN WQVSNQVDSQ LKPLICALRN KNLLVGLMIE RINDAIVMTG
KVSEQQQQQI MAVAQGLEPT HASGLKLVFQ NIPVRDELNH LLNASVVTYG GNAQSPFIEL
SSGVRLSTGS KLDNGYVVEY MNIHGLDLSR AGELIHVPLI F
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