Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal_1467 |
Symbol | |
ID | 4842910 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS155 |
Kingdom | Bacteria |
Replicon accession | NC_009052 |
Strand | - |
Start bp | 1703116 |
End bp | 1704006 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640118687 |
Product | diguanylate cyclase |
Protein accession | YP_001049854 |
Protein GI | 126173705 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2199] FOG: GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACTTTG GCCTAGCGAC CGAGCTATAT CCCGACGAAT ATCGCTATCA AACAGAACAT TATAGTCCCA ATAATAATCC ATTGGACTTG GTACAAGTGA TCCAACAACT GCACGCCAGT TTAGATCCAA GGACAGTCTT TGCCTGCTAT GGCAAAGTGC TTGGACAACA CTTGCCGATC CAAGGTGTGC GCTTAAGTTA TGGCGAACAT AAATTAAGCT GGGGCAAACG TTATGGTATC AGCGTCAAAC GACAGCTGAT ATGTGCAGGT ATGCCACTGA CGATTCAATA CCAGTTATTA ACGCCACTGA CGCCATCGCA AACCTCGAAC CTCAAAGAGA TTGAGCCGCT GTTATTGCAA CCGTTATTAA ATGCAATGCA ATACCAAGAA ATGTCGATGC AAGCCATGTT TGACTCGCTC ACAGGTTTAG GTAATCGCCA TTACTACAGT CAAAGTCTCA GCAATGCGAC CGCCAGAGCC CATAGAAAAC AAGGCTCTGT CGCACTCATA GTGCTCGATT TAGATAACTT TAAACAGCTA AATGATAAAT TCGGCCATAA ATGTGGTGAT TATATACTGA AGGAATTTGG CGACATCATA CGTGCGACCA TACGTAATAC GGATCAAGCA TTCCGTATCG GCGGTGACGA ATTCGTTATT ATTGTCCAAG GTAATATTCA TGCGGCAGGC TTGTTGTGCG AACGGATTGT CTCGGCCATC AATCAGCACA GTAGTTTCAC CCAGTTTGGG GTGAGCTGTA GTTTAGGTGC GGCAGAATCA CACGATACCA TTGAAGCCGA ACAACTTTAT GAACTTGCCG ATAAGGCGCT ATATCAAGCT AAAGCAGCGG GACGTAACTG CTATAAACTC AGCCAAAATC AATTAGTTTA G
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Protein sequence | MDFGLATELY PDEYRYQTEH YSPNNNPLDL VQVIQQLHAS LDPRTVFACY GKVLGQHLPI QGVRLSYGEH KLSWGKRYGI SVKRQLICAG MPLTIQYQLL TPLTPSQTSN LKEIEPLLLQ PLLNAMQYQE MSMQAMFDSL TGLGNRHYYS QSLSNATARA HRKQGSVALI VLDLDNFKQL NDKFGHKCGD YILKEFGDII RATIRNTDQA FRIGGDEFVI IVQGNIHAAG LLCERIVSAI NQHSSFTQFG VSCSLGAAES HDTIEAEQLY ELADKALYQA KAAGRNCYKL SQNQLV
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