| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_1454 |
|---|
| Symbol | |
|---|
| ID | 4842897 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS155 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009052 |
|---|
| Strand | + |
|---|
| Start bp | 1686085 |
|---|
| End bp | 1686912 |
|---|
| Gene Length | 828 bp |
|---|
| Protein Length | 275 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640118674 |
|---|
| Product | undecaprenyl diphosphate synthase |
|---|
| Protein accession | YP_001049841 |
|---|
| Protein GI | 126173692 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0020] Undecaprenyl pyrophosphate synthase |
|---|
| TIGRFAM ID | [TIGR00055] undecaprenyl diphosphate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.000000365113 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCATCCA CAGTGGAACT TGATCCGCAC CCTAGGACGA GTGAGAGTGA TTTACACACT
CAAACGACCT TGCCGGGACA ATTACCCGAA CTCGTGAAAC AGTCGTTACC TAAGCATGTT
GCCATTATCA TGGATGGCAA TGGGCGCTGG GCACAAACCC AAGGTAAACC ACGAGTGTTG
GGACATAAGG CCGGTGTTAA GGCCGTTAGA AGAGCCGTAA GCACGGCAAG CCAATTGGGC
ATTGAATCGC TAACGTTATT TGCATTTTCT AGCGAGAATT GGCGAAGACC CGATAAAGAA
GTCAGCTTGC TGATGGAATT GTTTTTTACC GTATTACAGC GCGAAATTAA ATTGCTGCAT
AAGAATCAGG TTAAGCTGAA GATTATTGGT GATATCAGCC GTTTTTCGGC GCGATTACAG
AAGCAAATTG CAGCTGCGCA AGATAAAACA TCAGGCAATA CTGGCTTGGT TCTGAATGTT
GCCGCTAACT ATGGTGGCCG TTGGGACATA CTTCAAGCAG CCCAAAAATT AGCGGAAAAG
GTCGAAACTG GCGAAATGAC CAGCAGTCAG TTCACCGAAG AAGCCTTAAG TGCACATTTG
TGCATGCAAA ATCAGAGTGA AGTTGATTTA ATGATCCGCA CGGGCGGGGA CTGTCGCATC
AGCAATTTTG TGCTGTGGCA GGCGGCCTAT GCAGAATTGG TGTTTACTGA CACCCTTTGG
CCTGATTTCG ATGAACAGGC TTTTCATGAA GCGATTGCCA TTTTTGCAAG TCGCCAGCGC
CGCTTTGGTT TGACTGGAAG TCAGATTGAT GAGATGCGTG CATTGTAA
|
|---|
| Protein sequence | MSSTVELDPH PRTSESDLHT QTTLPGQLPE LVKQSLPKHV AIIMDGNGRW AQTQGKPRVL
GHKAGVKAVR RAVSTASQLG IESLTLFAFS SENWRRPDKE VSLLMELFFT VLQREIKLLH
KNQVKLKIIG DISRFSARLQ KQIAAAQDKT SGNTGLVLNV AANYGGRWDI LQAAQKLAEK
VETGEMTSSQ FTEEALSAHL CMQNQSEVDL MIRTGGDCRI SNFVLWQAAY AELVFTDTLW
PDFDEQAFHE AIAIFASRQR RFGLTGSQID EMRAL
|
|---|
| |