| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_1417 |
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| Symbol | |
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| ID | 4841544 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS155 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009052 |
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| Strand | + |
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| Start bp | 1633486 |
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| End bp | 1634859 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640118637 |
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| Product | sigma-54 dependent trancsriptional regulator |
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| Protein accession | YP_001049804 |
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| Protein GI | 126173655 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTCGAT TGACACTTTT TTATCACCTG CAGGATGTAA ACGCCGAACA AGCCATCTTA
GAACTCGCCG GCGCTGCCGA CTTTAATAAG CTACGCAGTG TCGATGATTT ACCTTGGATA
GAACAGCTTG AGGCGAATCA CGTCGATGTT GCCATCATTG AGCTGTCCAG CCTTAGCCGT
GAGGATTATC TCGGGCTACT GGACAATGTA GCTCTGTCCA ATATCGAGTT TATTTTTCTC
TCCGACGGCC AGCCGAACCC CAATCTTGAT CAGTTAATGT CGCATTTTGC CGGTTATCAT
TTTCGAAAAC CCTACGACAT GACGTTAATC AGCGATATTT TCGCCGATTT TGCTCAGTAT
CTAGTGTCAT CCCCAATTCG GCCTCGGCCT TTTTCCAGTG AGCTAGACCA ATATGGTTTA
CTCGTCGGTT CCTCTGCTGC GATGCATAAG CTGTATCGAA CGATTCGCCG CGTCTCCGCG
ACCGACAGTA ATGTGCTGAT CATCGGTGAG AGCGGTGCGG GGAAAGAGCT GGTCGCTAAT
ACCATACATC TTGCCAGCCC TAGGCTGAAC GAGCCTTTTA TCGCGATTAA CTGCGGCGCC
TTAAGCCCTG AATTGGTCGA TAGCGAGTTG TTTGGCCACG TAAAAGGCGC ATTCACTGGC
GCTCATCGCG ATCACAAAGG CGTATTTGAG CAGGCAGAAG GCGGAACCTT ATTTCTCGAT
GAAGTCACCG AAATGCCAAT TGAGCATCAA GTGAAGTTAC TCAGAGTGCT TGAAAATAGC
GAATATCGCC CCGTTGGCGG TGCCAAAGTG CAACTCGCCA ATGTGCGGAT TGTCGCGGCC
ACCAATCGTG ATCCCATCGC GGCAATCGAG GCTGGGCAAT TTCGCGAGGA TTTATATTTC
CGTTTGGCCC AGTTCCCTAT CCGCGTTCCG CCATTAAGGG AACGTGGCGA TGATATTCTT
GGGTTGGCGC AGCATTTTCT TGCCTATCGT AACGTGGCAG AAAAGCAGAA TAAAAGCCTC
GCTGACGACA GTGCGCAGAT GATCGCTGCG TACCCTTGGT CGGGTAATGT GCGTGAATTA
AAGCATGCCA TTGAGCGAGC CTATATTTTG GCAGACCAAG AGATTTTACC CAGCCATTTA
CAGTTGCCAC AGGCAAGTGA AATGGGTGCT TCTGGCGATG ACCAAGTCGT TATCCCGCAG
GGCATGCGTT TAGATGACTT AGAAAAAATC GCCATTTATC AAGCATTAGA AACGACTCAA
GGCAATAAAA CCGATACCGC CGAGCAGCTG GGGATCAGCG TGAAAACTCT CTACAACAAG
CTCAGCAAGT ACGAGCAGCA AGTCGAAGCG GGTGAATCGA ATGCAGAGAT GTAG
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| Protein sequence | MARLTLFYHL QDVNAEQAIL ELAGAADFNK LRSVDDLPWI EQLEANHVDV AIIELSSLSR
EDYLGLLDNV ALSNIEFIFL SDGQPNPNLD QLMSHFAGYH FRKPYDMTLI SDIFADFAQY
LVSSPIRPRP FSSELDQYGL LVGSSAAMHK LYRTIRRVSA TDSNVLIIGE SGAGKELVAN
TIHLASPRLN EPFIAINCGA LSPELVDSEL FGHVKGAFTG AHRDHKGVFE QAEGGTLFLD
EVTEMPIEHQ VKLLRVLENS EYRPVGGAKV QLANVRIVAA TNRDPIAAIE AGQFREDLYF
RLAQFPIRVP PLRERGDDIL GLAQHFLAYR NVAEKQNKSL ADDSAQMIAA YPWSGNVREL
KHAIERAYIL ADQEILPSHL QLPQASEMGA SGDDQVVIPQ GMRLDDLEKI AIYQALETTQ
GNKTDTAEQL GISVKTLYNK LSKYEQQVEA GESNAEM
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