Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal_1389 |
Symbol | |
ID | 4844005 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS155 |
Kingdom | Bacteria |
Replicon accession | NC_009052 |
Strand | + |
Start bp | 1595797 |
End bp | 1597470 |
Gene Length | 1674 bp |
Protein Length | 557 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640118609 |
Product | periplasmic/7TM domain sensor diguanylate cyclase |
Protein accession | YP_001049776 |
Protein GI | 126173627 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2199] FOG: GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACAAAC TTAAACAAAT CCTATTTTGG TGTTTTTTAC TTTTTATATG GACATTAAGT CCCTCTGTAT TAAGCGCTGA AATTGCGTTG GACTCGCCGT ATTTGTTCCA TGCTCAAGCG GATCAACAGC CCCCAAAACA GTTTGATGCC GTGCCCCATT GGATGGGCCA ACTCGACGAA GCTAACTCTG TGAGTTTAAC CGGCGGTGAC TATTGGATGA TCACGCCTGT GATGGTCAAT CAACGTCAGT CGAATTGGGT AGTGGATGCG AGTAATTCGA TTATCGAATC CGTAGATTAT TGGATACTCG GCAGTGATGG CAGTTCACAG CATGCCCACA GCGGCTACAG TGCCCCCTAC GAATTTTTAT TTGATTATGG CCGCAAGGTC ACCTTGAATA TGGGCACGGA TTATTGGCTA TTGGTTAAGC TCAGTAGCCG TTATTATTCA TCGCCTCCCG AGATTGCCCT GCAAAGTGTG ACGGATCATC AGTTGATGTC TGATCGCCTC GCCATGGCAG TGCTGCTGTG CTTAGGCGGC TTATTGTTTA TCGCCTTATA TAATCTTCTG ATTTATATCT CTATTCTCGA TAAAGCTTTT CTTTATTATG GCCTTTATGT CTTCGCGTAT TTTGCTGGCT GGGCACTGAC CTTCCATTTG CCGGCGCACT TGTTTAATTT CCATTACCTT GAGTTACACC ATCTATTCTT TATCAGTTTA CCGATTTTTA ATATCATGTT TTACAAGCAC TTCTTGCAGC TGCCTAGTTA CTCACCACGA TTGTGGCGCC TCAGTCAGTA TTTGATGTTT GCTTGTATTG TTGCTTTGCC GACCAGTATT TGGTTGTTGC CCTATACGGC TATTATTGCC TCAGTGCTGA TCATGTTGTG GATTGCCTTA GCGATTACCT GTGGTAATGT CTGCTTGATG AAAGGCTTTG CCCCTGCACG TTATTTTATT CTCGCCTTTA CTTGTTTACT CTTGCCTGCG GTGATTATTT TGCCCGGGAA TATGGGGCTA ACCCCTGACT TTATTGAACA TGCGGAGCTG GCGACGCTGA TGGGCGGCAC GGCCGATGCG CTGCTGTTGT CCTTAGCGTT AGCGAATAAG CTTAAGTTAC TCGCAGAGGA ACGTAAGGCG CATATTGAAG AGCTCGCGAT TGCGTGGGAA AAAGCCCGCT TAGATGGCTT GACCCGAGTC GGCAATCGTT ATGCCTTTGA TGAATATATG AATTCGCAAT TAGGCTTCGC CGATAAAGTG GTGCAGCCTA TGGCTTTAGC GCTATTGAAT ATTGATAGCC TGAAAAGTGT TAACGAAACG CTCGGCCATC AAGAGGGCGA TAGATTACTG CAAGTGGTAG TGCAGTTATT GCAAGCAACG GACTTAGCGC ATTTAAAGCT TTATCGTATT AGTGGTGATG AGTTTGTGGT TGTGACGCCT TCGGTGGGGA TCCCGCTATT GCTGAGTTCG TTAAATGGGT TACGCGAACA ATTAGCCAGC CAAGGCTTTA AGGATTGTCA GTGTAGTTTT GGGATCTCGT TAAACTCTGA GGTGGCCGAT CCCCATGAAT GGCTGCGTTT GGCAGACACT AACTTGTACC AATCACGAAT GGATAAGCGC CGCCAAGAGT ATGCCGATAC TCGCGGGGTC GATGTAAGAC TACATTTAAG CTAA
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Protein sequence | MNKLKQILFW CFLLFIWTLS PSVLSAEIAL DSPYLFHAQA DQQPPKQFDA VPHWMGQLDE ANSVSLTGGD YWMITPVMVN QRQSNWVVDA SNSIIESVDY WILGSDGSSQ HAHSGYSAPY EFLFDYGRKV TLNMGTDYWL LVKLSSRYYS SPPEIALQSV TDHQLMSDRL AMAVLLCLGG LLFIALYNLL IYISILDKAF LYYGLYVFAY FAGWALTFHL PAHLFNFHYL ELHHLFFISL PIFNIMFYKH FLQLPSYSPR LWRLSQYLMF ACIVALPTSI WLLPYTAIIA SVLIMLWIAL AITCGNVCLM KGFAPARYFI LAFTCLLLPA VIILPGNMGL TPDFIEHAEL ATLMGGTADA LLLSLALANK LKLLAEERKA HIEELAIAWE KARLDGLTRV GNRYAFDEYM NSQLGFADKV VQPMALALLN IDSLKSVNET LGHQEGDRLL QVVVQLLQAT DLAHLKLYRI SGDEFVVVTP SVGIPLLLSS LNGLREQLAS QGFKDCQCSF GISLNSEVAD PHEWLRLADT NLYQSRMDKR RQEYADTRGV DVRLHLS
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