Gene Sbal_1389 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal_1389 
Symbol 
ID4844005 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS155 
KingdomBacteria 
Replicon accessionNC_009052 
Strand
Start bp1595797 
End bp1597470 
Gene Length1674 bp 
Protein Length557 aa 
Translation table11 
GC content46% 
IMG OID640118609 
Productperiplasmic/7TM domain sensor diguanylate cyclase 
Protein accessionYP_001049776 
Protein GI126173627 
COG category[T] Signal transduction mechanisms 
COG ID[COG2199] FOG: GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAAAC TTAAACAAAT CCTATTTTGG TGTTTTTTAC TTTTTATATG GACATTAAGT 
CCCTCTGTAT TAAGCGCTGA AATTGCGTTG GACTCGCCGT ATTTGTTCCA TGCTCAAGCG
GATCAACAGC CCCCAAAACA GTTTGATGCC GTGCCCCATT GGATGGGCCA ACTCGACGAA
GCTAACTCTG TGAGTTTAAC CGGCGGTGAC TATTGGATGA TCACGCCTGT GATGGTCAAT
CAACGTCAGT CGAATTGGGT AGTGGATGCG AGTAATTCGA TTATCGAATC CGTAGATTAT
TGGATACTCG GCAGTGATGG CAGTTCACAG CATGCCCACA GCGGCTACAG TGCCCCCTAC
GAATTTTTAT TTGATTATGG CCGCAAGGTC ACCTTGAATA TGGGCACGGA TTATTGGCTA
TTGGTTAAGC TCAGTAGCCG TTATTATTCA TCGCCTCCCG AGATTGCCCT GCAAAGTGTG
ACGGATCATC AGTTGATGTC TGATCGCCTC GCCATGGCAG TGCTGCTGTG CTTAGGCGGC
TTATTGTTTA TCGCCTTATA TAATCTTCTG ATTTATATCT CTATTCTCGA TAAAGCTTTT
CTTTATTATG GCCTTTATGT CTTCGCGTAT TTTGCTGGCT GGGCACTGAC CTTCCATTTG
CCGGCGCACT TGTTTAATTT CCATTACCTT GAGTTACACC ATCTATTCTT TATCAGTTTA
CCGATTTTTA ATATCATGTT TTACAAGCAC TTCTTGCAGC TGCCTAGTTA CTCACCACGA
TTGTGGCGCC TCAGTCAGTA TTTGATGTTT GCTTGTATTG TTGCTTTGCC GACCAGTATT
TGGTTGTTGC CCTATACGGC TATTATTGCC TCAGTGCTGA TCATGTTGTG GATTGCCTTA
GCGATTACCT GTGGTAATGT CTGCTTGATG AAAGGCTTTG CCCCTGCACG TTATTTTATT
CTCGCCTTTA CTTGTTTACT CTTGCCTGCG GTGATTATTT TGCCCGGGAA TATGGGGCTA
ACCCCTGACT TTATTGAACA TGCGGAGCTG GCGACGCTGA TGGGCGGCAC GGCCGATGCG
CTGCTGTTGT CCTTAGCGTT AGCGAATAAG CTTAAGTTAC TCGCAGAGGA ACGTAAGGCG
CATATTGAAG AGCTCGCGAT TGCGTGGGAA AAAGCCCGCT TAGATGGCTT GACCCGAGTC
GGCAATCGTT ATGCCTTTGA TGAATATATG AATTCGCAAT TAGGCTTCGC CGATAAAGTG
GTGCAGCCTA TGGCTTTAGC GCTATTGAAT ATTGATAGCC TGAAAAGTGT TAACGAAACG
CTCGGCCATC AAGAGGGCGA TAGATTACTG CAAGTGGTAG TGCAGTTATT GCAAGCAACG
GACTTAGCGC ATTTAAAGCT TTATCGTATT AGTGGTGATG AGTTTGTGGT TGTGACGCCT
TCGGTGGGGA TCCCGCTATT GCTGAGTTCG TTAAATGGGT TACGCGAACA ATTAGCCAGC
CAAGGCTTTA AGGATTGTCA GTGTAGTTTT GGGATCTCGT TAAACTCTGA GGTGGCCGAT
CCCCATGAAT GGCTGCGTTT GGCAGACACT AACTTGTACC AATCACGAAT GGATAAGCGC
CGCCAAGAGT ATGCCGATAC TCGCGGGGTC GATGTAAGAC TACATTTAAG CTAA
 
Protein sequence
MNKLKQILFW CFLLFIWTLS PSVLSAEIAL DSPYLFHAQA DQQPPKQFDA VPHWMGQLDE 
ANSVSLTGGD YWMITPVMVN QRQSNWVVDA SNSIIESVDY WILGSDGSSQ HAHSGYSAPY
EFLFDYGRKV TLNMGTDYWL LVKLSSRYYS SPPEIALQSV TDHQLMSDRL AMAVLLCLGG
LLFIALYNLL IYISILDKAF LYYGLYVFAY FAGWALTFHL PAHLFNFHYL ELHHLFFISL
PIFNIMFYKH FLQLPSYSPR LWRLSQYLMF ACIVALPTSI WLLPYTAIIA SVLIMLWIAL
AITCGNVCLM KGFAPARYFI LAFTCLLLPA VIILPGNMGL TPDFIEHAEL ATLMGGTADA
LLLSLALANK LKLLAEERKA HIEELAIAWE KARLDGLTRV GNRYAFDEYM NSQLGFADKV
VQPMALALLN IDSLKSVNET LGHQEGDRLL QVVVQLLQAT DLAHLKLYRI SGDEFVVVTP
SVGIPLLLSS LNGLREQLAS QGFKDCQCSF GISLNSEVAD PHEWLRLADT NLYQSRMDKR
RQEYADTRGV DVRLHLS