| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_1325 |
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| Symbol | |
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| ID | 4843751 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS155 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009052 |
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| Strand | + |
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| Start bp | 1509339 |
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| End bp | 1511024 |
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| Gene Length | 1686 bp |
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| Protein Length | 561 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640118545 |
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| Product | choline dehydrogenase |
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| Protein accession | YP_001049712 |
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| Protein GI | 126173563 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | [TIGR01810] choline dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGCCCATT CACTCCAGCA AAAATATTAT AACTACATCA TAGTCGGCGC CGGTTCTGCA
GGGTGTGTGC TTGCCAATCG CTTGTCTAAG GATCCTAAAA ACGAAGTACT GTTATTAGAA
ACCGGTGGCA GTGATAAGAG CATCTTTATT CAGATGCCGA CGGCGTTATC GATTCCGATG
AACAGCCCTA AATATGCTTG GCAGTTTGAG ACGCAGCCTG AGCCGCATTT AGATAATCGC
AAGATGCATT GCCCTCGGGG CAAAGTGCTT GGCGGTTCAT CGTCGATCAA TGGCATGGTG
TATGTTCGTG GTCATGCCAG GGACTTTGAT GAGTGGCAGG CGCAAGGGGC GACCAACTGG
GATTACAGCC ATTGCTTACC GTACTTTAAA AAGGCAGAAA CCTGGGCCTT TGGTGGCGAT
GAGTATCGCG GCGAGTCTGG ACCGTTAGGT GTGAATAACG GCAATCAGAT GCAAAATCCT
TTATACCAAG CGTTTGTGGA TGCGGGCATC GCGGCGGGGT ATTTATCGAC CGCCGATTAT
AATGCGGCGC AGCAAGAAGG TTTTGGCCCT ATGCACATGA CGGTCAAAAA AGGCGTGCGT
TGGTCTACCG CTAATGCCTA TTTACGCCCA GCGATGGCCA GACGTAACCT TACTGTGTTG
ACCCACACCT TAGTGCATAA AGTGTTATTG GAAGGGCAAG CTGCCGTTGG CGTTCGCATT
GAGCACAAAG GCAAAGTTGA AGATATTCGT TGTAATAAAG AAGTGATTTT AGCTGCTGGC
TCAATAGGTT CACCGCATTT ACTGCAATTA TCAGGTATTG GCGATCCCCA AGTATTGGCC
GATGCAGGGG TCGAGTTACA ACATGAGTTG CCCGGTGTCG GTCAGAATTT ACAGGATCAT
TTAGAGTTTT ATTTCCAATT CAAATGCCTT AAACCGATTT CACTCAATGG CAAGTTAGAT
CCTTTCAGCA AGTTCTTAAT CGGTGCCCGT TGGATCTTAG ATAAGTCAGG CCTAGGGGCC
ACGAATCACT TTGAATCCTG TGGTTTTATT CGCTCAAAAG CGGGCCTCGA GTGGCCAGAT
TTGCAGTACC ACTTTTTACC TGCGGCTATG CGCTACGATG GTAAAGAAGC CTTTGCTGGG
CATGGTTTTC AGGTGCATGT AGGGCATAAC AAGCCTAAAA GCCGTGGTGC CGTGACCTTA
GTATCGGCAG ATCCTAAAGC GCCGCCTAAG ATCCAGTTCA ATTATTTACA GCATCCCGAT
GATATTGAAG GCTTTAGAGC CTGTGTGCGT TTAACCCGTG AGATCATCAA TCAAGCGCCA
TTCGATGAGT ATCGCGGCGA GGAAATTCAA CCCGGCACAC AAGTGCAAAC CGATGAGCAA
ATCGATGCCT TTGTGCGTCA ATCGGTTGAG AGTGCTTATC ATCCTTCTTG TTCATGCAAG
ATGGGCACTG ATGCGATGGC CGTAGTGGAT CCTGAAACCC GCGTGCATGG CTTGCAGAAT
TTACGGGTAG TGGATTCTTC TATTTTCCCG ACTATCCCGA ACGGCAACTT GAACGCGCCG
ACCATCATGT TGGCTGAGCG CGCTGCGGAT ATGATCTTAG AGGCTGAGAT GTTAGCGCCG
GCGGATTCCG CCGTTGTGGT TGCCGACGCT TGGCAAACCA CACAAAGAAG CACTGCGACA
AGTTAA
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| Protein sequence | MAHSLQQKYY NYIIVGAGSA GCVLANRLSK DPKNEVLLLE TGGSDKSIFI QMPTALSIPM
NSPKYAWQFE TQPEPHLDNR KMHCPRGKVL GGSSSINGMV YVRGHARDFD EWQAQGATNW
DYSHCLPYFK KAETWAFGGD EYRGESGPLG VNNGNQMQNP LYQAFVDAGI AAGYLSTADY
NAAQQEGFGP MHMTVKKGVR WSTANAYLRP AMARRNLTVL THTLVHKVLL EGQAAVGVRI
EHKGKVEDIR CNKEVILAAG SIGSPHLLQL SGIGDPQVLA DAGVELQHEL PGVGQNLQDH
LEFYFQFKCL KPISLNGKLD PFSKFLIGAR WILDKSGLGA TNHFESCGFI RSKAGLEWPD
LQYHFLPAAM RYDGKEAFAG HGFQVHVGHN KPKSRGAVTL VSADPKAPPK IQFNYLQHPD
DIEGFRACVR LTREIINQAP FDEYRGEEIQ PGTQVQTDEQ IDAFVRQSVE SAYHPSCSCK
MGTDAMAVVD PETRVHGLQN LRVVDSSIFP TIPNGNLNAP TIMLAERAAD MILEAEMLAP
ADSAVVVADA WQTTQRSTAT S
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