| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_1117 |
|---|
| Symbol | |
|---|
| ID | 4845427 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS155 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009052 |
|---|
| Strand | - |
|---|
| Start bp | 1285074 |
|---|
| End bp | 1286645 |
|---|
| Gene Length | 1572 bp |
|---|
| Protein Length | 523 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640118338 |
|---|
| Product | amino acid/peptide transporter |
|---|
| Protein accession | YP_001049507 |
|---|
| Protein GI | 126173358 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG3104] Dipeptide/tripeptide permease |
|---|
| TIGRFAM ID | [TIGR00924] amino acid/peptide transporter (Peptide:H+ symporter), bacterial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTGGAAG CAAGCGATAT GACTATTGGG ACTGCTCCGG TAAGTAAAAC ACATTCATTT
ATGACAGTGT CTCTTATCGA ATTATGGGAA CGCTTTGGTT ATTACGGTAT GCAAGCGCTG
ATTGTGTACT TTATGGTGCA GCGCCTTGGC TTTGATGACT CACGTGCAAA CTTAGTATGG
AGTGCCTGTG CGGCGCTCAT TTATGTATCA CCGGCGATTG GTGGTTGGGT TGGGGATAAA
ATCCTCGGCA CTAAACGCAC TATGCTGCTC GGCGCGGGGA TTTTGTCTCT GGGTTATGCG
CTGATGGCCG TACCCACTGA AAATACGTGG TTTATGTTTT CAGCGCTCGG CGTGATTGTG
GTCGGTAACG GCCTGTTCAA ACCCAATGCC GGTAACTTAG TTCGTAAAAT TTACGAAGGT
GACGATTCTA AAATCGACAG TGCGTTTACT ATCTATTATA TGGCGGTCAA CGTCGGCTCA
ACCTTCTCTA TGTTGCTGAC GCCTTGGATT AAAGATTACG TCAACGCCCA GTATGGTAAC
GAATTCGGCT GGCATGCCGC TTTTGCCGTG TGTTGTGTCG GCATATTGGT GGGGTTAGGC
AACTATGCAC TTATGCGTAA GAGTTTAGTC CATTACGGTT CTGAGCCAGA TACTCGCCCA
GTGAATAAGA AAAGCCTCGC AATTGTGTTA GCTCTATCCG CATTGTCGGT TGTCGCTTCG
GCCATTATTC TGGAATATGA AGCGGTTGCC CGTGTCTTTG TTTACGCCGC TGGCGTAGCC
GTATTGGCCA TTTTCTTCCA CTTGATCCGC ACCAGCGAAA CCAGTGAACG AGCGGGACTG
ATTGCGGCGC TGATCCTCAC AGTGCAAACC GTGTTCTTCT TTATCTTCTA TCAACAAATG
TCGACGTCAT TGGCGCTGTT TGCCTTGCGT AAAGTGGACT GGGATTTCCA AATCTTTGGT
ACCCATTTGT GGACTTGGTC ACCGGCCCAG TTCCAAGCAT TGAATCCATT ATGGATTATG
GTGTTAAGTC CAATCTTGGC TTGGAGTTAT TCGTGGGCAG GTCGTAATGA TAAAGACTTC
TCTATCGCGG CGAAATTTGC CCTCGGTTTT GCCGTCGTGG CTATAGGCTT CTTTATCTAT
GGCTTTGCCG GACAATTTGC CGTCAACGGC AAAACCTCTT CATGGATCAT GATCTGGGGC
TATGCCTCTT ACTCTTTAGG CGAATTGCTG GTGAGTGGTC TTGGTCTTGC CATGATTGCT
CGCTACGTAC CTGCACGCAT GGGCGGCTTT ATGATGGGCG CCTATTTCGT CGCCTCAGGT
ATTTCACAGT ATCTGGGCGG TGTGGTCGCT AACTTCGCCA GTGTGCCAAA AGATTTAGTC
GATCCACTGC AAACCTTGCC CGTATACACC AGTCTATTTA ATAAGTTAGG TATCGCGGCT
GTGGTTTGTA CCTTTATCGC CCTTGCGGTA TTACCGCTAA TGCGTCGCCT GACTGAGACT
CACCATTCAC ATAATAATAC TGAGAATGAA AGTGCTGCGG CATCGCTAAG GGATGTGAAA
GCCGAGCAGT AA
|
|---|
| Protein sequence | MLEASDMTIG TAPVSKTHSF MTVSLIELWE RFGYYGMQAL IVYFMVQRLG FDDSRANLVW
SACAALIYVS PAIGGWVGDK ILGTKRTMLL GAGILSLGYA LMAVPTENTW FMFSALGVIV
VGNGLFKPNA GNLVRKIYEG DDSKIDSAFT IYYMAVNVGS TFSMLLTPWI KDYVNAQYGN
EFGWHAAFAV CCVGILVGLG NYALMRKSLV HYGSEPDTRP VNKKSLAIVL ALSALSVVAS
AIILEYEAVA RVFVYAAGVA VLAIFFHLIR TSETSERAGL IAALILTVQT VFFFIFYQQM
STSLALFALR KVDWDFQIFG THLWTWSPAQ FQALNPLWIM VLSPILAWSY SWAGRNDKDF
SIAAKFALGF AVVAIGFFIY GFAGQFAVNG KTSSWIMIWG YASYSLGELL VSGLGLAMIA
RYVPARMGGF MMGAYFVASG ISQYLGGVVA NFASVPKDLV DPLQTLPVYT SLFNKLGIAA
VVCTFIALAV LPLMRRLTET HHSHNNTENE SAAASLRDVK AEQ
|
|---|
| |