| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_0886 |
|---|
| Symbol | |
|---|
| ID | 4844270 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS155 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009052 |
|---|
| Strand | - |
|---|
| Start bp | 1012132 |
|---|
| End bp | 1012689 |
|---|
| Gene Length | 558 bp |
|---|
| Protein Length | 185 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640118105 |
|---|
| Product | peptide deformylase |
|---|
| Protein accession | YP_001049280 |
|---|
| Protein GI | 126173131 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
|---|
| TIGRFAM ID | [TIGR00079] peptide deformylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00000428038 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTAAAC ATTTGATGCC AAAACAAACC CCGCCTTTAT TACCCATAGC GTTAGTGGGT
GAAGCTATCC TAGGGCAGAC TGCAATTACA GTGCATCATT TCGATGCCGA GCTCGCGCAC
CTTGCAGAGC AAATGTCTGC CAGCATGGAA GCCGCCAAAG GCGTTGGCAT CGCGGCGCCA
CAGGTTCACA GTCCCTTAGC TTTATTTATT ATGGCTTCTC GACCTAATGA ACGTTATCCC
GACGCACCCA ATATGGCGCC TGTAGTCGTG GTTAATCCGC AAATCATTCA TGCATCGAGT
GACTTAGTCG GCGGCGAAGA AGGTTGCCTG TCCGTTCCCG GCCAAAGATT TAACATACTA
AGACATCAAG CCATTGAAGT GCGCTACCAG AATTTACAAG GCGAGTGGCA ACAGGCCGAA
TTAACAGGCT TTATTGCGCG GATTTTTCAA CACGAATTTG ATCACCTACA AGGGATCACC
TTACTCGAGC GTTCACGTAT GCCTGAACAG GCTCAGTTGA TTTCAGCCCA GTCCATCGAA
CAAGGTGAAG CGCAATAA
|
|---|
| Protein sequence | MFKHLMPKQT PPLLPIALVG EAILGQTAIT VHHFDAELAH LAEQMSASME AAKGVGIAAP
QVHSPLALFI MASRPNERYP DAPNMAPVVV VNPQIIHASS DLVGGEEGCL SVPGQRFNIL
RHQAIEVRYQ NLQGEWQQAE LTGFIARIFQ HEFDHLQGIT LLERSRMPEQ AQLISAQSIE
QGEAQ
|
|---|
| |