| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal_0547 |
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| Symbol | |
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| ID | 4842731 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS155 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009052 |
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| Strand | - |
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| Start bp | 616687 |
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| End bp | 619890 |
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| Gene Length | 3204 bp |
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| Protein Length | 1067 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640117766 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_001048945 |
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| Protein GI | 126172796 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3264] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCACGTA TTTTATTGTT CGTTATTGCT TTTTTCTCAT TTTCCGTCCT AGCCAATTCG
CCTTTGCAGT TGGACAAACG TCTTGGCATA AACAAGCAAG ATCAGCAACA AAATCTCAGC
ATTGATGAAC AAATTAACGA CCTAAAAATT AACATAGAGA AGCTCGCCGC CAGTGCGACC
AGTTTCCAAC AGGCGCAAAT CGATTTTGAA CAACACAAGA AGCGCACCAA TCAAGCACTG
AAAGAAGCCT ACAAACCTCT CTCTCTGGAA AAAGGCACAG ACCTCAGCCA GCAAGCTTCG
ATGGCCTATA TTCGTTTATC TGAGCTTAAA GAAAGCGAAT CGACCCTTGG CCGACAAGTA
AACGATTTAT TACAGCGCCA CAACGACTTA CCCACAGTGA TCGCCAGCGC GAGGCAGAGT
GTCGCCCAAA ACAAAAAGGC TGAACTCGCC CCACTTGATA CCCCAACGGG TGAGTTACAA
CAAACTCAAC GACTCTTCTT TGAACAAAGC CTTGCGACCA ATGAGGCTGA ACTCGCCAGC
AGCCAAAAAC GCATTGAACT GACTCAATTA CAATTACAGC TAGTACGGCA ACAACTCGTG
CAGCAAGAAG CCTTGATTGA AACCATCAAC AAGGCGATCA ATAAACAACG TCAGCAACAA
ACCGATGCCA CTTTAGCCAA AAACTTAGTC AACACGGGCA AAGTCGTCGA TCCTATTACC
CGCAACATTG CCGACACTAA CCAGATTTAT GGCCAGAAAC TGCAAACCTT AACCTTGCAG
ATCAACAATG TGGTCGAGCA ACAAGAGCAG TCGGAAACTC AATATCAATC CCAAGCCAAA
CAGTTGGCGA ACATCCAAGA ACAGATCACT TGGGTCAAAA TGAACTCCGC CTTTGGTGAG
CGCTTTTTGC AAATGTTGCA ATCACTGCCT AAGCCGCCAA ACCACGAAAA ACTGCAAACC
CTGATCGCCG ATGCGCGCCT AGACAGATAC CATTTAGAGC AGCAACAAGC CCTTAATGAT
CAAGAATTAG AACAGCCCGG CTTGTACAAT GAGCAACAGA TTAAACTACT GCACTCGCAG
CAAAGTTTGA TCTCGCAGTT GATGCAAAGC TATGACCAAT ACTTGAGTGA ATTAGGCAAG
TTGAAGGTCA ACTATCAACA ACTGAGTCAG CAACATCTCA CCCTCAAAAA TACCCTTAAC
GAGCATTTAT TCTGGGTGCC TAATGCTGCC AGTATCAGTA AGTTATGGCT GACCGACCTT
GAGCGCAGCG CGGTTTGGTT AGTACAGCAA GCGCAGTGGG ATGAACTGGG GAAAGCGTGG
GAAGAGCAAA ACGATTATTG GTCTTGGTGG ATCATATTGC TGGTACTGTG TTTAGTCGTA
CAGGACTTAA TCACGCCTAA ATTCAATCGC TTGCTAAATC ATTACACCAC TTATGTGGGC
AATGTGACCC AAGATAAATT TATTTATACT CTCAAGGCAC TCGCCTGTAG TGTCAGTTAT
GCCTTGATAA AACCCTTCCC GGTGATCATG GCGGGATTGA TTTTTTATCA ATCCGATCGC
AACTTTGTGC AAGCAGTGGG CATGGGCATA CTGGCGATTG GTTTAGTTTA CCTCTTATAT
CGCTTCATCT TTATTCTGAC GCTCGACAAA GGCGTACTCG TGGGCCATTT CAAACGCCCC
TCGAAGCTCA TCCAAGCGGG ACAATCAAGG CTCAGGCACT TTGTGCTGGT CGCCAGTCCA
TTATTAGGCT TGATGGGCTT TACCGAAGTA CTCGACACCT CACTGGTGCG CAACAGCATA
GGCCGTGGTG CCTTTATTGT TTTCTGTATC GTTTTATTCT TGTTATACAA AGATATCTTA
ATTCTTAGCC GTAAAAACTC GGATGCCAAG AAAGACGGTA AAAACAAAAA ACTCATTCAG
AAAATCCTCT GGACCTTGCT GATTTCTGTA CCTTTGTTGA GTGCCGGATT AGCCTTTAGA
GGTTACTACT TCACCGCTTT CCAAATGCTG TTACAACTGC AATTGTCGAT CGTACTTGGT
CTCGGTTTCT TGCTGTTATA CCAACTGATC AAACGCTGGA TGTTAATTGA ACGTCGTCGT
ATCGCCTTCG ACCGCGCCAA GGCAAAACGT GCCGAACGCT TGGCCCAACG GGAGAAAGGC
GAAACCCATC ATCTCTCCGC CGATGGACTC GATACCTACG AAGAACCCGT GGTCGATCTG
GAAACCATTT CGAGCCAATC CCTCGGCCTA GTGCGTTCAC TGTTGTTATT GGCCTTTTTA
GCCAGCTTGA TTGGTCTGTG GACTCAAACC CATACGGCGC TGTTTTCCTT CCTCGACGGC
ATCACGCTGT GGACGACTAA TACCAGCATT AATGGCCTAG AACAACAGTT GCCCATTACC
ATGAAGTCCT TGATGTTTGG CCTGATAGTG GTCGGTTTCT CGCTGATGAT TGCCACTAAT
CTCCCCGGCT TACTTGAGTT GATGATCCTA CAAAGACTCG ATCTCTCCCC AGGCACAGGG
TTTGCGATCA CAACCGTCAG CCGTTATCTG GTGGTGTTCT TAGGGTTATT AATCGGCTTC
TCTAATCTCG GGATGGAATG GTCTAAGTTA CAATGGCTAA TTGCTGCACT ATCGCTCGGT
TTAGGTTTTG GTTTACAAGA GATTTTCGCC AACTTTATTT CGGGTCTGAT CATTTTATTT
GAAAAGCCAG TGCGGATTGG CGACACAGTG ACGATTCGCG ATTTAACGGG AACCGTGAGT
AAAATTCAAA TTCGGGCGAC AACGATTATC GATTGGGATA GAAAGGAAAT TATCATCCCG
AACAAGGCCT TTATCACAGA GCAGTTGATC AACTGGTCTT TGTCAGATCC TATTACTCGG
GTCATTGTTT ATGTGTCGGT GGCGCGGGAT TCTGATCCCG CCAAAGTCGA AGCGACGCTG
TACCAAGCGG TGCAAGAATG TGAAGATGCA CTTGCCAGCC CAGAACCTGA AGTCTGGTTT
GCCGGCTTTG GTAAACACAC CCAAGATTAT GAAGTGCGCG CCTATGCGAA AGATATGTCG
GCACGTTGGC CACTGCGCCA TGATTTACAT AAACGAGTGA CTAAAAAACT CAAAGAAAAC
AATCTCGAAC TCGCCTATCC GCAGATGGAA ATCCATATTA AGAATGGTCA AAGTCGAGAG
CAACAAGGCA TTATTAGAAG CTAA
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| Protein sequence | MPRILLFVIA FFSFSVLANS PLQLDKRLGI NKQDQQQNLS IDEQINDLKI NIEKLAASAT
SFQQAQIDFE QHKKRTNQAL KEAYKPLSLE KGTDLSQQAS MAYIRLSELK ESESTLGRQV
NDLLQRHNDL PTVIASARQS VAQNKKAELA PLDTPTGELQ QTQRLFFEQS LATNEAELAS
SQKRIELTQL QLQLVRQQLV QQEALIETIN KAINKQRQQQ TDATLAKNLV NTGKVVDPIT
RNIADTNQIY GQKLQTLTLQ INNVVEQQEQ SETQYQSQAK QLANIQEQIT WVKMNSAFGE
RFLQMLQSLP KPPNHEKLQT LIADARLDRY HLEQQQALND QELEQPGLYN EQQIKLLHSQ
QSLISQLMQS YDQYLSELGK LKVNYQQLSQ QHLTLKNTLN EHLFWVPNAA SISKLWLTDL
ERSAVWLVQQ AQWDELGKAW EEQNDYWSWW IILLVLCLVV QDLITPKFNR LLNHYTTYVG
NVTQDKFIYT LKALACSVSY ALIKPFPVIM AGLIFYQSDR NFVQAVGMGI LAIGLVYLLY
RFIFILTLDK GVLVGHFKRP SKLIQAGQSR LRHFVLVASP LLGLMGFTEV LDTSLVRNSI
GRGAFIVFCI VLFLLYKDIL ILSRKNSDAK KDGKNKKLIQ KILWTLLISV PLLSAGLAFR
GYYFTAFQML LQLQLSIVLG LGFLLLYQLI KRWMLIERRR IAFDRAKAKR AERLAQREKG
ETHHLSADGL DTYEEPVVDL ETISSQSLGL VRSLLLLAFL ASLIGLWTQT HTALFSFLDG
ITLWTTNTSI NGLEQQLPIT MKSLMFGLIV VGFSLMIATN LPGLLELMIL QRLDLSPGTG
FAITTVSRYL VVFLGLLIGF SNLGMEWSKL QWLIAALSLG LGFGLQEIFA NFISGLIILF
EKPVRIGDTV TIRDLTGTVS KIQIRATTII DWDRKEIIIP NKAFITEQLI NWSLSDPITR
VIVYVSVARD SDPAKVEATL YQAVQECEDA LASPEPEVWF AGFGKHTQDY EVRAYAKDMS
ARWPLRHDLH KRVTKKLKEN NLELAYPQME IHIKNGQSRE QQGIIRS
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