| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_4477 |
|---|
| Symbol | |
|---|
| ID | 7094394 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011668 |
|---|
| Strand | + |
|---|
| Start bp | 62349 |
|---|
| End bp | 64223 |
|---|
| Gene Length | 1875 bp |
|---|
| Protein Length | 624 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 643467340 |
|---|
| Product | ParB domain protein nuclease |
|---|
| Protein accession | YP_002364298 |
|---|
| Protein GI | 217980322 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1475] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | [TIGR00180] ParB-like partition proteins |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.000000629481 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 77 |
|---|
| Fosmid unclonability p-value | 0.555503 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAAACT CAATTCAAAC GCAAGCAACG CACACTAAAG CCGCCATTTC ACCGACCAGC
CACAAGACTA AAGCAGGCTC AAACAAGCCC GATATTCTCC AGAAATCCGT AAAGGCGAGC
AATGCTGTGG TGACGTTGGC CGCTACAGCC AAGCCAGTGT TAATGCAGTT ACCGATTAAT
CAATTGGTGC TGTCTGATTT GAACGTGCGT AAAGGGGATG CGTCTAAAGC TGACGATGAA
CAGTTGTATG CCTCTATTTT GGCGCATGGC ATTTTACAAA ATTTGTTAGT CGAGCCTAAG
AATGCACAGG GTTTATACCC TGTGTTGGGC GGTGGCCGCA GGCTGAAACA ACTGATTAAA
GCGGTTAAGA ATAATAAGTT GAAACCTACC TCGCTGGTGT CGGTCAAGTT ACTGACTGTG
GATGAAGTGG CGAATTTTGC GACCGAGCTA TCTCTGACTG AAAACTTCAT GCGCGCCAAT
ATGCACCCAG TCGATGAATT TCACGCATTT GCTGAGATGG TGAATAAGGG CGCGAGCATT
GCTGATGTGG CGGCGCGGTT TGGTGTCAAA GCGAAGTTCG TACAGCAGCG GATGAAGTTA
AGCATGGTCG CGCCGGTCGT GCTCGATGCG TATAAAGCGG GGAACGTGTC ACTTGATATC
GTAATGGTGT TTACGATTGC CAGTGTCGAA AAGCAAGCCG AAGTGTGGGA GCTGGCAGGT
GATAGACGTT ACAACGAAAA CCAGTTCCGC AATATGCTTA AAGATGCCGC TGTGGATGCA
GAGCATTATC TGGCTCAGTT CGTAGGCCAA GAGGAATACG AAAAGGCGGG TGGGGTTGTG
ACCTCAGACT TGTTCAGTGA TGAAGTCTAC CTTGATGATA GAGCCTTGCT TGAGACGTTA
GCGACCGCAA AATTGGAAAT CGAAGCAGCA AAGTTAATCG CGCGTGGCTG GAAGTGGACA
CAGATAAAGT TAGTTTCTGA GTATGATGAA CTTGCAGGGT TTGGACGTCT TACCTTAAAA
GAGGGTGAGT ATGAACCCGC TGAAATGGCG CTAGCGGGGT GTTTGCTAGT GTTAAAAAGT
TATGGTGAGC CTGTCAGTAT CTATATGGGT TTGGTGCATA AAGACGACAA AAAGGCACTG
GCACAATTAA AAGCCAGTGT GCAATCTGGC TCATTGAATG ATGGTGATGT GAAAAAAATT
GAAGAGAAGG ACGCAAGCGG CTATTCGGCG GCACTCAATG AGGACTTACG GGCGCAGCGT
TTGATTATCA CGAAACATGC GTTAATGAGT GCGCCAACGG TGGCGCTTGA TACGTTGCAT
TTCTCTGTCT GTGTAAGCGC GTTCACAGAC TCACGTTATG GCAGCCGTCC ACTGCATATC
AGCGTTAACG ACACCACTTG CCATCCTAAA ACGGGAGCGC TCACGGATAA CAAAGCGTTG
CAGTTAATTG AAGAGGTGAA GACCAGCCTA AATTTAACGT GGGTTGAACT GCCAACGGTC
GCTGAACGCT TTAACGCTTT TTGCGCCCTC GATGTAAAAG AGAAAGAAAA GCAGGTGGCT
TACGCCACGG CTTCCATGCT TGAGGCATCC ATTGATAATA GCCATGCCGC CGCTGAGGCC
GTTATTTCGA CCCTCGATGT GAAATGGTCT AACTACTGGC GACCTACGGC AGAAACCTTC
TTTAAGCGCG TGAGCTTGTC TTGTTTAATT GATATGGCTC AGCCTGTCAT GGGTGAGCAG
TGGGCATTAC AAGCCGCCGC ACTCAAGAAA AAGGATTTGG CCATGCAGGT TGATAGCTTA
GTCAACGGTG AGCGTAAAGG GCTGGACGAT GCTCAAAAAT CTTACTTTGA TGCGCTGATG
CCAGCAGGTT TTTAA
|
|---|
| Protein sequence | MTNSIQTQAT HTKAAISPTS HKTKAGSNKP DILQKSVKAS NAVVTLAATA KPVLMQLPIN
QLVLSDLNVR KGDASKADDE QLYASILAHG ILQNLLVEPK NAQGLYPVLG GGRRLKQLIK
AVKNNKLKPT SLVSVKLLTV DEVANFATEL SLTENFMRAN MHPVDEFHAF AEMVNKGASI
ADVAARFGVK AKFVQQRMKL SMVAPVVLDA YKAGNVSLDI VMVFTIASVE KQAEVWELAG
DRRYNENQFR NMLKDAAVDA EHYLAQFVGQ EEYEKAGGVV TSDLFSDEVY LDDRALLETL
ATAKLEIEAA KLIARGWKWT QIKLVSEYDE LAGFGRLTLK EGEYEPAEMA LAGCLLVLKS
YGEPVSIYMG LVHKDDKKAL AQLKASVQSG SLNDGDVKKI EEKDASGYSA ALNEDLRAQR
LIITKHALMS APTVALDTLH FSVCVSAFTD SRYGSRPLHI SVNDTTCHPK TGALTDNKAL
QLIEEVKTSL NLTWVELPTV AERFNAFCAL DVKEKEKQVA YATASMLEAS IDNSHAAAEA
VISTLDVKWS NYWRPTAETF FKRVSLSCLI DMAQPVMGEQ WALQAAALKK KDLAMQVDSL
VNGERKGLDD AQKSYFDALM PAGF
|
|---|
| |