| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_4156 |
|---|
| Symbol | |
|---|
| ID | 7088479 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | + |
|---|
| Start bp | 4935741 |
|---|
| End bp | 4936697 |
|---|
| Gene Length | 957 bp |
|---|
| Protein Length | 318 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 643463035 |
|---|
| Product | transcriptional regulator, LysR family |
|---|
| Protein accession | YP_002360050 |
|---|
| Protein GI | 217975299 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 81 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACATTCA CTAAGTCCTA TAAGGAATTA ATTGCCGTGA TAAATAATCA ATTTGTTGAG
ATACGCCATT TCGTCACAGT TGCCCAGCTC GGCAGTTTTA CCTTAGCGGC GCAGGCGTTA
GGCATGACTG GTTCGGCGCT CAGTAAAAGC ATAGTGCGAT TAGAAACCCG CTTAGGCACT
AAGCTGCTGC ACCGCACCAC ACGGCGTGTG AGCTTAACCA ATGATGGCGA TTCGTATCTC
ACAGATTGCC AAAATGCCAT GGCAATCCTA GACAATGCAC AGAGCCGACT CGGCAGCGAA
CAGCAAATTC CCTCAGGTCG AGTGCGAGTG GATTTACCTG TAACGTTTGG GCGGCGATAT
ATACTGCCAA CCCTATTATC ACTATCGCAA AAATATCCCA AGCTCGAGTT ATCCATTACC
TTTAACGATA GAGCGACCGA TTTGTTTAGT GACGGCATTG ATTTGGCGGT GCGTGTCGGA
CAACTCGGCG ACACTGTGGA TTTAGTCGCC CGCAGATTAG GGGAACAACG CCGAGTGATC
TGCGCGTCTC CCGCCTATTT CGCTCGACTT GGCACGCCAC AAGGCAAAGC AGATCTCAGC
CAGCACCAAT GCATTGTCGG CTGGCCGCTC GGGCAGCAAC ATCGCTGGTT ACTTAAAAAT
GAGGATGGGA TCATCGAGGC CTATGACATT CCAGTACGCC ACGAAATCGC TGATTGCGAA
GCCATTTTAG CGGCCACACT GGCGGGAGTG GGTTTAGCGC AGGTGCCAAT ATGGTTGGTT
GAGGACTATC TTAAAACTGG TGAACTTATC TCGGTACTGG ACGAACTCGC CAGTGACGAC
ACACCTATCC ACCTGATTTG GCTTAAAACC CCTTACCTCC AACCCAAGCT ACGGGTGATC
ATCGAAGAAC TGGCCGAATT AGCCAAAACG CCAAAAAGCA GATTTAAGGC AGAATAA
|
|---|
| Protein sequence | MTFTKSYKEL IAVINNQFVE IRHFVTVAQL GSFTLAAQAL GMTGSALSKS IVRLETRLGT
KLLHRTTRRV SLTNDGDSYL TDCQNAMAIL DNAQSRLGSE QQIPSGRVRV DLPVTFGRRY
ILPTLLSLSQ KYPKLELSIT FNDRATDLFS DGIDLAVRVG QLGDTVDLVA RRLGEQRRVI
CASPAYFARL GTPQGKADLS QHQCIVGWPL GQQHRWLLKN EDGIIEAYDI PVRHEIADCE
AILAATLAGV GLAQVPIWLV EDYLKTGELI SVLDELASDD TPIHLIWLKT PYLQPKLRVI
IEELAELAKT PKSRFKAE
|
|---|
| |