Gene Sbal223_4150 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_4150 
Symbol 
ID7088473 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp4929005 
End bp4929937 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content50% 
IMG OID643463029 
Productprotoheme IX farnesyltransferase 
Protein accessionYP_002360044 
Protein GI217975293 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0109] Polyprenyltransferase (cytochrome oxidase assembly factor) 
TIGRFAM ID[TIGR01473] protoheme IX farnesyltransferase 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones73 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAATAC AAGACAGATT TATGTCACCG CAATGGAAAG CACGCTTCAA AGGGTATGTG 
CAGGTTACTA AGCCTGGCAT CATTTTCGGG AATCTGATTT CCGTTGCTGG CGGTTTTTTA
TTAGCCGCCA AAGGCGACGT AAATCTGGTC TTGATGCTAG CGAGCTTAGT GGGATTGTCC
TTGGTCGTAG CCTCGGGCTG CGCAATCAAT AACTGTATTG ACCGTGATAT CGACGCCAAG
ATGCAGCGAA CCTGCAAACG CGTGACCGTC ACGGGCGAAA TTGCCGTGGG TAACGTCCTC
GCGTTTGGAC TCGCCTTAGG CGTGTTGGGC TTTAGCATCT TAGCCTTGTT TACCAATGCA
TTAGCCCTGC TATTTGCTGT TATTGGTTAC ATAGTATATG TGGGGGTTTA TAGCCTCTAC
ATGAAACGTA ACTCAGTGTA TGGCACTTTA GTTGGCAGCT TCTCGGGCGC AGTACCGCCC
GTAGTTGGCT ATTGCAGCGT GACAGGGCAA ATGGACATGG GCGCGGCTAT TTTGCTGTTG
ATGTTCAGTC TATGGCAGAT GCCACATTCT TACGCCATCG CGATTTTCCG TTTTAATGAC
TATGCGGCCG CCAATATTCC AGTACTGCCG GTTGCAGAAG GCATGACCAA AGCAAAACTG
CATATCGTGC TTTATATTGC CGTGTTCGCC TTAGTCAGTG CACTGTTGCC ACTCGCGGGT
TACACAGGTA TCGCCTTTAT GGCGGTCACC TGCGCCACCA GCCTGTGGTG GCTTGCCATG
GCATTAAAAG GTTATCGCCA CGGCGTCGAC ATGCAACGCT GGGCTCGCCA AGTGTTTGGG
TTTTCAATCA TCACTATTAC GGCGCTTAGT GTGACTATGG CGCTCGACTT CCAAGTCGTG
AGTCAGGCGC CACTGCTCAC CTTAGTGAAG TAA
 
Protein sequence
MQIQDRFMSP QWKARFKGYV QVTKPGIIFG NLISVAGGFL LAAKGDVNLV LMLASLVGLS 
LVVASGCAIN NCIDRDIDAK MQRTCKRVTV TGEIAVGNVL AFGLALGVLG FSILALFTNA
LALLFAVIGY IVYVGVYSLY MKRNSVYGTL VGSFSGAVPP VVGYCSVTGQ MDMGAAILLL
MFSLWQMPHS YAIAIFRFND YAAANIPVLP VAEGMTKAKL HIVLYIAVFA LVSALLPLAG
YTGIAFMAVT CATSLWWLAM ALKGYRHGVD MQRWARQVFG FSIITITALS VTMALDFQVV
SQAPLLTLVK