| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_4114 |
|---|
| Symbol | |
|---|
| ID | 7088437 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | + |
|---|
| Start bp | 4884490 |
|---|
| End bp | 4885071 |
|---|
| Gene Length | 582 bp |
|---|
| Protein Length | 193 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 643462993 |
|---|
| Product | cytochrome C oxidase assembly protein |
|---|
| Protein accession | YP_002360008 |
|---|
| Protein GI | 217975257 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG3175] Cytochrome oxidase assembly factor |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 60 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGAACC ATCACCAGCC AGAAAAACCT AAGTCAAATC GAAAGCTTAT CAGCATGCTC
GTCATGGGCT GTATTGGTAT GTTTGGTTTT GGGTTCGCGC TGGTGCCGCT ATACGATGTG
CTGTGTGAGA AGCTAGGGAT TAACGGTAAA ACCTCAAATA CTGCCAGTAG TTATCAAGCG
ATAACCATAG ATACTAGCCG TATTGTCACA GTGGAATTTA TCTCCCAAGT GCAAACGGGT
ATGCCGTGGA AATTTGAGCC GCAAACCAAG CGGCTCGAAG TTCACCCCGG CGAACTGATA
CACACAGCAT TTTTGGCACG CAATGTGTCA GACAGAGCCA CGGTCGGTCA GGCGATACCT
TCAATATCAC CTGGGCAAGG CGCGGCATAT TTTAATAAAA CGGAATGTTT TTGCTTTAAC
CAACAGCACT TAGCGGCTTC GACCAGCGCT GAGTTGCCGC TCATTTTCTT TGTGGATCCT
CAGTTACCTG AATCCATCCA CACTCTGACC CTCTCTTACA CCCTCTACGA CATTACCGAC
AAGCAGTTAG CGTCTGCCAT AGAGCAAGGA GCTGCAAAAT GA
|
|---|
| Protein sequence | MTNHHQPEKP KSNRKLISML VMGCIGMFGF GFALVPLYDV LCEKLGINGK TSNTASSYQA
ITIDTSRIVT VEFISQVQTG MPWKFEPQTK RLEVHPGELI HTAFLARNVS DRATVGQAIP
SISPGQGAAY FNKTECFCFN QQHLAASTSA ELPLIFFVDP QLPESIHTLT LSYTLYDITD
KQLASAIEQG AAK
|
|---|
| |