| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_4057 |
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| Symbol | rpsJ |
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| ID | 7089675 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | - |
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| Start bp | 4812437 |
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| End bp | 4812748 |
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| Gene Length | 312 bp |
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| Protein Length | 103 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 643462935 |
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| Product | 30S ribosomal protein S10 |
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| Protein accession | YP_002359953 |
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| Protein GI | 217975202 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0051] Ribosomal protein S10 |
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| TIGRFAM ID | [TIGR01049] ribosomal protein S10, bacterial/organelle |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000000379961 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000000000138432 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGCAGAACC AAAGAATCCG TATCCGCTTA AAGGGATTTG ATCATCGCTT AATTGATCAA
TCTACAGCGG AAATCGTTGA AACTGCTAAG CGTACAGGCG CTCAAGTACG TGGTCCAATT
CCACTACCTA CGCGTAAAGA GCGTTATACC ATTTTGATCT CTCCGCACGT TAATAAAGAT
GCTCGTGACC AGTACGAATT ACGTACACAC AAGCGCCTGG TTGACATCGT AGAGCCAACT
GAAAAGACTG TAGACGCGTT AATGCGTTTA GATCTTGCGG CTGGTGTCGA CGTACAGATT
AGCTTGGGTT AA
|
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| Protein sequence | MQNQRIRIRL KGFDHRLIDQ STAEIVETAK RTGAQVRGPI PLPTRKERYT ILISPHVNKD
ARDQYELRTH KRLVDIVEPT EKTVDALMRL DLAAGVDVQI SLG
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