Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_3921 |
Symbol | |
ID | 7086684 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | - |
Start bp | 4673238 |
End bp | 4673963 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 643462798 |
Product | extracellular solute-binding protein family 3 |
Protein accession | YP_002359819 |
Protein GI | 217975068 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCTTGA GTTTGCTGTT AATCTGCCTA TTAATCTTAC CGACGTATGC ATTTCCTGCC TCGATAACCA TTGGTAGTGC GTTAAATCGC CCACCCTATA TTATCGAAGA TGCCGAATCG GGACTTGAGA TTGATATTAT TAAGGCTGCC TTTAAGGAAA TGGGCCAGTC AGTTAACTTT AAATTTTACT CTCGTAAGCG CCAAGTCTTA TATTTCAACA AAGACAGATT AGATGCCGTG ATGACCATGA ATCCCGCAAA TGGTGTCGAT GGCTATTGGT CTAATGATTA TGTCGACTAT ACCAATGTGG CGATTAGCTT GGCTGCGCAA CACCTTGAAA TAAAAAGTAT TGCCGATCTA AAAAACTACA GTATTGCGGC CTTTGAAAAT GCTCGCCTAT TGCTCGGTGC TGAATTTAAT GCCGTAGCGC AACAGACGAT TTATCGCGAA GTTGATACTC AATTAAGCCA AAATCGTATG TTGTACTTAG GCCGGATTAA TACTGTGATT GCCGACCGTT ATATCTTCAC TCAATTGAAT CGGTTTGTTG AGCCCAATAT CGACACCCAG CAAGCATTGA GCTATCACTT TATTTTCCCG CCGACATCTT ATCGCATGGT GTTCCACAAC TCAGTGGCGC GGGATACTTT TAATCAAGGG CTGGCAAAAA TTAAGGCCAA TGGGATTTAT CAGACCTTAG TGGTCAAATA CTTAGGCAGT GCTTAG
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Protein sequence | MRLSLLLICL LILPTYAFPA SITIGSALNR PPYIIEDAES GLEIDIIKAA FKEMGQSVNF KFYSRKRQVL YFNKDRLDAV MTMNPANGVD GYWSNDYVDY TNVAISLAAQ HLEIKSIADL KNYSIAAFEN ARLLLGAEFN AVAQQTIYRE VDTQLSQNRM LYLGRINTVI ADRYIFTQLN RFVEPNIDTQ QALSYHFIFP PTSYRMVFHN SVARDTFNQG LAKIKANGIY QTLVVKYLGS A
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