| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_3855 |
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| Symbol | |
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| ID | 7088890 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | - |
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| Start bp | 4577767 |
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| End bp | 4579764 |
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| Gene Length | 1998 bp |
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| Protein Length | 665 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 643462734 |
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| Product | pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase |
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| Protein accession | YP_002359755 |
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| Protein GI | 217975004 |
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| COG category | [C] Energy production and conversion
[I] Lipid transport and metabolism |
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| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes
[COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit |
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| TIGRFAM ID | [TIGR01348] pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.000000583648 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCTGAAT TAAAAGAAGT TTTTGTTCCT GATATCGGCG GCGATGAAGT GCAAGTGATC
GAAATCTGTG TGGCTGTGGG TGATACCCTA GCCGCAGAAG AATCGATTCT TACCGTCGAA
AGCGACAAGG CGACTATGGA TATTCCAGCG CCTTTCGCCG GTGTTTTAGC CGAATTGAAA
GTGGCTGTGG GCGATAAAGT ATCTGAAGGT ACTTTGATCG CTATGATGCA AGCGGCGGGC
GCGGCAGCTG CCGCTCCGGC TCCAGTTGCA GCACCCGCTC AGGCGGCACC AGCATCTGCA
CCAGTTCAAG CGGCTCCTGC TGCTCCAGCA GCTTCGGCTC AAGCCGTTGA GACCAAAGTG
GTTGAAGTGA CTGTTCCTGA TATCGGTGGC GACACTGATG TGTCAATTAT CGAAGTGCTG
GTTGCTGTCG GTGATAAGAT TGAGGTTGAT AGCGGTTTAA TTACCCTAGA AACAGACAAG
GCGACAATGG ACGTACCCTC ACCTTTCGCG GGTGTGGTTA AAGACGTTAA AGTCGCAGTC
GGCGATAAAG TGTCGCAAGG CTCTTTAGTC ATCATGCTTG AAGTTGGCGG CGCTGCACCT
GTAGCCGCGC CAGCTGCAAC CGTTGCTGCC CAAGCTGCTC CTGCCGCTAC GGTAGCGCCA
GTGGCCGCAG CACCTGCTGC ACCAGCGGCA AGTGTGGTTG AGGTCAAAGA AATTCAAGTG
CCTGATATTG GCGATGCCAG CAATGTCGAT GTGATCGAAG TGCTCGTGTC TGTCGGTGAT
GAAATCACTG CCGACCAAGG TTTGATTACC CTTGAAACTG ACAAAGCCAC CATGGAAGTA
CCTGCGCCAT TCGCCGGTAA ACTGCTGTCT TTGACTGTTA AAGTGGGTGA CAAGGTTTCT
CAAGGTAGCG TCATTGCGAC GATTGAGACT GTCACTGCAG GTGCAGCTCC TGCACCTGTT
GCTCAAGCTG CGGCTCCAGT GAGTGCGGCG CCAGTTGCTG CACCAACACC AGCAAGCCGT
CCTCCAGTAC CACACCACCC AAGCGCAGGT ACACCTGTGT CTACCGGTGC GGTACATGCG
TCTCCTGCGG TACGTCGTTT AGCCCGTGAA TTTGGTGTCG ATTTGACCCA AGTTGCTGGT
ACTGGCCGTA AAGGTCGCAT CATGAAAGAA GACGTACAGG CGTATGTGAA ATACGAACTG
TCTCGTCCGA AAGCGACTGC GGCAACCTCT GTGGGTTCAG GTAACGGCGG CGGTCTGCAA
GTGATTGCAG CACCTAAAGT TGATTTCAGT AAGTTTGGTG AAGTGGAAGA GATTCCATTA
AGCCGTATCC AGAAGATTTC TGGTCCTAAC TTACACCGCA ACTGGGTAAC TATCCCTCAC
GTGACTCAGT TCGATGAAGC TGATATCACT GAAATGGAAG AGTTCCGTAA GCAGCAAAAC
GATGTAGCGG CGAAGAAAAA AGCCGATTAC AAGATCACGC CTTTAGTGTT TATGCTAAAA
GCTGTGGCTA AAACGTTGCA ACAGTTCCCA GTGTTCAACT CAAGCTTAAG TAGCGATGGC
GAATCACTGA TCCAGAAGAA GTATTTCCAC ATCGGTGTGG CGGTTGATAC GCCAAACGGT
TTGGTTGTGC CAGTCGTGCG TGACGTGGAT AAGAAAGGCA TTATCGAGTT ATCTCGTGAA
CTTGCTGACA TCTCTATCCG TGCCCGTGAT GGCAAGCTGA AATCTGCTGA CATGCAAGGT
AGCTGTTTCA CCATTTCAAG TTTAGGTGGC ATCGGCGGTA CAGCGTTTAC GCCTATCGTG
AACTACCCAG ACGTGGCGAT TTTAGGTGTG TCTAAATCTG ACATTAAGCC TAAGTGGAAT
GGTAAAGAGT TCGAACCTAA ATTGATGTTG CCACTGTCGC TGTCATACGA TCACCGTGTG
ATCGATGGTG CTATGGCTGC ACGCTTTAGT GTGACGCTGT CAGGAATTCT GTCCGATATT
CGTACTTTGG TTCTGTAA
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| Protein sequence | MAELKEVFVP DIGGDEVQVI EICVAVGDTL AAEESILTVE SDKATMDIPA PFAGVLAELK
VAVGDKVSEG TLIAMMQAAG AAAAAPAPVA APAQAAPASA PVQAAPAAPA ASAQAVETKV
VEVTVPDIGG DTDVSIIEVL VAVGDKIEVD SGLITLETDK ATMDVPSPFA GVVKDVKVAV
GDKVSQGSLV IMLEVGGAAP VAAPAATVAA QAAPAATVAP VAAAPAAPAA SVVEVKEIQV
PDIGDASNVD VIEVLVSVGD EITADQGLIT LETDKATMEV PAPFAGKLLS LTVKVGDKVS
QGSVIATIET VTAGAAPAPV AQAAAPVSAA PVAAPTPASR PPVPHHPSAG TPVSTGAVHA
SPAVRRLARE FGVDLTQVAG TGRKGRIMKE DVQAYVKYEL SRPKATAATS VGSGNGGGLQ
VIAAPKVDFS KFGEVEEIPL SRIQKISGPN LHRNWVTIPH VTQFDEADIT EMEEFRKQQN
DVAAKKKADY KITPLVFMLK AVAKTLQQFP VFNSSLSSDG ESLIQKKYFH IGVAVDTPNG
LVVPVVRDVD KKGIIELSRE LADISIRARD GKLKSADMQG SCFTISSLGG IGGTAFTPIV
NYPDVAILGV SKSDIKPKWN GKEFEPKLML PLSLSYDHRV IDGAMAARFS VTLSGILSDI
RTLVL
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