| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_3569 |
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| Symbol | |
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| ID | 7088684 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | + |
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| Start bp | 4233895 |
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| End bp | 4235817 |
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| Gene Length | 1923 bp |
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| Protein Length | 640 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 643462453 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_002359474 |
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| Protein GI | 217974723 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCTACGTC CACTTATATC TTTATCACTT ACCTTTTGGC TGCTTTTACT GCCGCTCAGT
CACGCTATGG CTGAAGAAAA GACTCAGGTT GATAAAATAT TTGAAAGATT TGAAAGCGGT
GAGACCATGA CCCGCGAAGC AATTAAGAGT GATCTTGCGC TATTGAGTAA ACTGATTGCA
ACCGATGATA TCGCCCGTAA TGAAAAGCTG CAGCTACTTA AATGCTGGGA TCAAAGTGCC
GAAACGGATA CTGACATAGC ACTGGCAGTT AAGAATACGA GTCAAACACT AACAAATATT
CCACCAACGG CCTCTCCGCA TTTCATTACC GACCTCATGC TTTGTCATTC TTGGTTTTTG
CAGCTAAATG GTGATGTAGA TAGCGCGATG GAAGGTTATA ACCTCAGCGT TAAGCGTGCC
TATGAGCATG AAGATCTTAA ACTAATTGCC GACTCACGTA GCCTTCGCGG CGCCCTGTAT
TCCTATATTG GCGATTTTTC TGCCGCATTA GACGACCTCA TAACAGCGCA AGATCTCTAC
GAGTCACTGA ATTTAACCGG CTGGGCTAAC ATCAATCTTG CCGATATGGC CACCAGCTTT
AGACGTTATG GCGATCCCCA AAGTGCGATC CGTTATTACA CTAAACTCAA AGCAGTTTAT
TTAAAGAACA ATAACCAAGA ACAGGCAATG TATGTCACCT CAGAGATAGG CCTTGCCTTA
GATGAACTAG GTGAACATCA ACAAGCTATT GATCACTTCT TGCTCAGCTA CCAATACTTT
AAGGAACATC AGCTGGAAAA AGTGGCCGCC ACTATGGCGA CGGATATTGC CTTTAGCTTA
ATCAAACTCC ATCGTCTTAA TGAAGCGGAA AAATATTTAA CTGAAGCCGC AGCTGTGATT
AACGAAAAAG ATCATGCCGC TTATAGCTTT ATGAAGCTCT TTATGGGCAA TATCAAGTTT
CAGCAAGCAC GTTATAAAGA AGCGCTTACC GAACTCGAAC AAGGGGAAAA AGCCTTTCGA
ACCCTGCAAA ATGATCGGGG ACTCACCCAA CTATTACAGC TAAAAAGTGA CGTCTATGCG
GCCATGAATA ATTTACCTGC GGCCTATGGC GCATTGCTGG AATTTGTCGC CCTCACCAAA
AAGATCGACG ACAACTCCTT CTCACATCAA ACCACAGAAT TAAAAGTGAA GTTTGATACC
ACTAGGATTG AATCTGAAAA TCAACGTTTG ATTGAAAACC AAAACCTTAA AGAACAAGAA
CTCGCGCTAC TCGAGAAGAA TAAATCATTA CAACACATTA TTTTATTATT GACGGGCTTT
ATCCTGACAA TAGTGTCAAT ATTTGCGTAT AAACAAGTAC AGAGAAATCG CCAACTGCAG
GTCATCGCCC TCACAGATTA CCTCACCAAG CTCCCTAATC GTCGGCATAT TTATGCCCAA
GCCGCGCAGT ATTTTCAGCA AGCCTTAAAA CAACAAAGCC CTTTTTCGGT GATAATCTTT
GATGCGGACC ACTTCAAGAA AATTAACGAT AACTTCGGCC ATGAACTGGG CGATCGCGCC
TTACTGACGA TCGCAAGCGC AGGTAAAGCC CTAACGGGTA ATAAAGATCT TATTGGCCGT
ATCGGTGGTG AAGAGTTTTT AATTCTCTTA CCCAACACGG ATGCTGAACG TGCTTGTGAA
CTTGCCCATC AGTTGCAAGC TCATATTAGC AGCCTAGGCG CAGAGCATTT ACCCACTGAA
CTCAAATTGA CCGTTAGCGC AGGAGTCGCA ACCTTAGCGC CGCAACCAAA TACTGAAAAT
ACTTATCAAG ACAGAGACTT TGCCAGCCTA CTGAAACGTG CCGACGATGC CCTTTATGAG
GCTAAAAATG CGGGAAGGAA TTGTGTTAAA GCTGCCAAAA ATGAGGCTAC GTGCGAGAGT
TAA
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| Protein sequence | MLRPLISLSL TFWLLLLPLS HAMAEEKTQV DKIFERFESG ETMTREAIKS DLALLSKLIA
TDDIARNEKL QLLKCWDQSA ETDTDIALAV KNTSQTLTNI PPTASPHFIT DLMLCHSWFL
QLNGDVDSAM EGYNLSVKRA YEHEDLKLIA DSRSLRGALY SYIGDFSAAL DDLITAQDLY
ESLNLTGWAN INLADMATSF RRYGDPQSAI RYYTKLKAVY LKNNNQEQAM YVTSEIGLAL
DELGEHQQAI DHFLLSYQYF KEHQLEKVAA TMATDIAFSL IKLHRLNEAE KYLTEAAAVI
NEKDHAAYSF MKLFMGNIKF QQARYKEALT ELEQGEKAFR TLQNDRGLTQ LLQLKSDVYA
AMNNLPAAYG ALLEFVALTK KIDDNSFSHQ TTELKVKFDT TRIESENQRL IENQNLKEQE
LALLEKNKSL QHIILLLTGF ILTIVSIFAY KQVQRNRQLQ VIALTDYLTK LPNRRHIYAQ
AAQYFQQALK QQSPFSVIIF DADHFKKIND NFGHELGDRA LLTIASAGKA LTGNKDLIGR
IGGEEFLILL PNTDAERACE LAHQLQAHIS SLGAEHLPTE LKLTVSAGVA TLAPQPNTEN
TYQDRDFASL LKRADDALYE AKNAGRNCVK AAKNEATCES
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