Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_3554 |
Symbol | |
ID | 7088667 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 4217406 |
End bp | 4218362 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 643462438 |
Product | hypothetical protein |
Protein accession | YP_002359459 |
Protein GI | 217974708 |
COG category | [S] Function unknown |
COG ID | [COG3595] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.00545866 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGTAACC TCAATCTCAC TAAAGCCAGT CTATTGGTTT CGACACTCTA TTTAGGTTTG ATGGGCAATG TGTTCGCAGC GCAAAGTGTT GATAAACAGC TTAATATTAG CAGCGACACC CAACTGCAGC TCAAAGTACA GCGCGGCGAT GTGACGATTC AAACCTGGGA TAAGAGTGAA GTCAGCGTCA CAGGTACACT CGATGAATTG AGCGAAGGCT TTGTGTTCGA GCAAAAGGGA AACAGCCTCA ATATCGAAGA CAAAATGCCC CGCCACTACA ATGGCAGTAA TGACAAAGGC TCGCAGCTCA CCATTAAAGT GCCAAAGACA GTAAAACTCA GTGCAGATAC TATTTCAGCA AATCTGCAAG TCGCCGAAGC CCAAGGTGAA CTCGATTTGA ATACCGTCAG TGGCGATATC AAAGCTAACA ACCTCAGTGG TAAACCTGAG TTGCACACAG TCTCAGGCGA CATCATCACT CAAGCACTCG ATGGTAAAGT GAAATTAGAG ACAGTATCAG GCACAATTCA AGACACTGAC AGTAAAGGGG AAATGAACTA TCGCCTCGTA AGTGGTGACT TAAAAAGTCA AACTCAGGCC GAAAAAGTCA CGGTTGAACA AGTTTCTGGC GAAGTGAATG CTAACTTTAG CCTCGCTAAG GAAATCGTAC TCAGAACCGT CAGCGGTGAC TCAAAAGTGT CACTGGCGAA AAACTTCAAC AGAGCTAATT TAGAAAGTGT GAGTGGCGAT ATCATAGTGA CTTTTGCCGA TATGCCAGAT GCCAGCTTTG ACTTAGACGG CGGCCCAGGT GGCAAGATCA AAAATACCTT AACCCAAGAT GAACCTAAAA AGCAGAAATA CGTGCCACGC GCCGAGCTGT CATTCCAAAC CGGTTCGGGT GCAGCCAGCG TAAAAATGAA CACTATCAGC GGTGATTTGG TTTTAAAGAA GCAGTAA
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Protein sequence | MSNLNLTKAS LLVSTLYLGL MGNVFAAQSV DKQLNISSDT QLQLKVQRGD VTIQTWDKSE VSVTGTLDEL SEGFVFEQKG NSLNIEDKMP RHYNGSNDKG SQLTIKVPKT VKLSADTISA NLQVAEAQGE LDLNTVSGDI KANNLSGKPE LHTVSGDIIT QALDGKVKLE TVSGTIQDTD SKGEMNYRLV SGDLKSQTQA EKVTVEQVSG EVNANFSLAK EIVLRTVSGD SKVSLAKNFN RANLESVSGD IIVTFADMPD ASFDLDGGPG GKIKNTLTQD EPKKQKYVPR AELSFQTGSG AASVKMNTIS GDLVLKKQ
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