Gene Sbal223_3554 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_3554 
Symbol 
ID7088667 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp4217406 
End bp4218362 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content45% 
IMG OID643462438 
Producthypothetical protein 
Protein accessionYP_002359459 
Protein GI217974708 
COG category[S] Function unknown 
COG ID[COG3595] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00545866 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGTAACC TCAATCTCAC TAAAGCCAGT CTATTGGTTT CGACACTCTA TTTAGGTTTG 
ATGGGCAATG TGTTCGCAGC GCAAAGTGTT GATAAACAGC TTAATATTAG CAGCGACACC
CAACTGCAGC TCAAAGTACA GCGCGGCGAT GTGACGATTC AAACCTGGGA TAAGAGTGAA
GTCAGCGTCA CAGGTACACT CGATGAATTG AGCGAAGGCT TTGTGTTCGA GCAAAAGGGA
AACAGCCTCA ATATCGAAGA CAAAATGCCC CGCCACTACA ATGGCAGTAA TGACAAAGGC
TCGCAGCTCA CCATTAAAGT GCCAAAGACA GTAAAACTCA GTGCAGATAC TATTTCAGCA
AATCTGCAAG TCGCCGAAGC CCAAGGTGAA CTCGATTTGA ATACCGTCAG TGGCGATATC
AAAGCTAACA ACCTCAGTGG TAAACCTGAG TTGCACACAG TCTCAGGCGA CATCATCACT
CAAGCACTCG ATGGTAAAGT GAAATTAGAG ACAGTATCAG GCACAATTCA AGACACTGAC
AGTAAAGGGG AAATGAACTA TCGCCTCGTA AGTGGTGACT TAAAAAGTCA AACTCAGGCC
GAAAAAGTCA CGGTTGAACA AGTTTCTGGC GAAGTGAATG CTAACTTTAG CCTCGCTAAG
GAAATCGTAC TCAGAACCGT CAGCGGTGAC TCAAAAGTGT CACTGGCGAA AAACTTCAAC
AGAGCTAATT TAGAAAGTGT GAGTGGCGAT ATCATAGTGA CTTTTGCCGA TATGCCAGAT
GCCAGCTTTG ACTTAGACGG CGGCCCAGGT GGCAAGATCA AAAATACCTT AACCCAAGAT
GAACCTAAAA AGCAGAAATA CGTGCCACGC GCCGAGCTGT CATTCCAAAC CGGTTCGGGT
GCAGCCAGCG TAAAAATGAA CACTATCAGC GGTGATTTGG TTTTAAAGAA GCAGTAA
 
Protein sequence
MSNLNLTKAS LLVSTLYLGL MGNVFAAQSV DKQLNISSDT QLQLKVQRGD VTIQTWDKSE 
VSVTGTLDEL SEGFVFEQKG NSLNIEDKMP RHYNGSNDKG SQLTIKVPKT VKLSADTISA
NLQVAEAQGE LDLNTVSGDI KANNLSGKPE LHTVSGDIIT QALDGKVKLE TVSGTIQDTD
SKGEMNYRLV SGDLKSQTQA EKVTVEQVSG EVNANFSLAK EIVLRTVSGD SKVSLAKNFN
RANLESVSGD IIVTFADMPD ASFDLDGGPG GKIKNTLTQD EPKKQKYVPR AELSFQTGSG
AASVKMNTIS GDLVLKKQ