Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_3541 |
Symbol | |
ID | 7088654 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | - |
Start bp | 4204220 |
End bp | 4205467 |
Gene Length | 1248 bp |
Protein Length | 415 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 643462425 |
Product | protein of unknown function DUF819 |
Protein accession | YP_002359446 |
Protein GI | 217974695 |
COG category | [S] Function unknown |
COG ID | [COG5505] Predicted integral membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00004318 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGACAAGCA CGGCTTTAGT GACGAACGAT GCCACGGCGT TAGGGATACT CGCGACAATT CTAGGTTTTG TATTTTATAC CAGTAGCAGT AGTCATCCTT TTTGGCAGAA GTTTTATCGT TTCATTCCCG CACTTTTATT GTGTTATTTT TTACCCTCTT TATTGAATAC CTTTGGGGTG ATCGACGGTA ATACCTCACA ACTGTATTTT GTGGCGTCAC GTTATTTACT GCCAGCGTGT TTAGTCTTAT TAATTTTAAG CGTTGATTTA AAAGCTATTT TAAGTTTAGG GCCGAAAGCC TTAATCATGT TTTTAACCGG CACTGTCGGT ATTGTCATCG GTGGCCCAAT TGCCTTGCTG TTAGTGTCGA TCATCGAGCC TTCTTTAATT GGAGTTGATG GTCCTGATGC GGTATGGCGC GGCATGACGA CCTTAGCCGG AAGCTGGATT GGTGGCGGCG CAAACCAAGC AGCGATGAAA GAAATCTATG CGGTAGGTGG CAATATTTTC TCTGTGATGG TGACAGTCGA TGTGATTGTC GCCAATATCT GGATGGCCGT ATTGTTGTTT ATGGCCTCAA AGGCGAAAGA GATTGATGCG AGAACGGGTG CCGATACCTC AGCAATTGAA GCGTTAAAAG ACAAAGTAGA AAAGTATCAT GCTGAAAATG CACGCATTCC TAATTTGCGC GATCTTATGC TGATTGTCGC CGTTGGCTTT GGTATCACTG GTATTGCCCA TATGGCCGCT GATTTCCTTG GGCCATTTTT TGAAGCGAAC TATCCTTGGA CCGAAGATTA CAGTTTAACC TCTAAGTTCT TCTGGTTAGT GGTGATAGTC ACAACCATTG GTTTGGCTAT GTCTTTCAGC CCTGTGCGCC ATTTAGAGGC GGCGGGGGCA TCAAAAGTGG CGTCGGCTTT CCTTTACATC TTAGTGGCGA CGATTGGTTT GCACATGGAT GTGAGTAAAG TGCTCGATAC GCCTTTGTAC TTTTTAGTGG GCATTATTTG GATGTTAGTG CACGCAGGCT TTATGTTATT GGTGGCTAAG TTGATTAAAG CCCCGCTGTT TTACATGGCT GTGGGTAGCC AAGCGAACGT CGGCGGTGCA GCATCTGCCC CTGTCGTTGC TGCGGCATTC CACCCCGCTC TAGCGCCTGT TGGCGTGCTG TTAGCCGTAT TTGGTTATGC GTTAGGGACT TACATGGCGT GGCTCTGTGG CCAGCTTTTA CAAGCAGTTG CGGCATAA
|
Protein sequence | MTSTALVTND ATALGILATI LGFVFYTSSS SHPFWQKFYR FIPALLLCYF LPSLLNTFGV IDGNTSQLYF VASRYLLPAC LVLLILSVDL KAILSLGPKA LIMFLTGTVG IVIGGPIALL LVSIIEPSLI GVDGPDAVWR GMTTLAGSWI GGGANQAAMK EIYAVGGNIF SVMVTVDVIV ANIWMAVLLF MASKAKEIDA RTGADTSAIE ALKDKVEKYH AENARIPNLR DLMLIVAVGF GITGIAHMAA DFLGPFFEAN YPWTEDYSLT SKFFWLVVIV TTIGLAMSFS PVRHLEAAGA SKVASAFLYI LVATIGLHMD VSKVLDTPLY FLVGIIWMLV HAGFMLLVAK LIKAPLFYMA VGSQANVGGA ASAPVVAAAF HPALAPVGVL LAVFGYALGT YMAWLCGQLL QAVAA
|
| |