Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_3459 |
Symbol | |
ID | 7086073 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | - |
Start bp | 4113341 |
End bp | 4114090 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 643462345 |
Product | transcriptional regulator, CadC |
Protein accession | YP_002359366 |
Protein GI | 217974615 |
COG category | [K] Transcription |
COG ID | [COG3710] DNA-binding winged-HTH domains |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTGTATGC AATTGGGAGA CTGCAGGTTT GATCGAGAAC GAGGCATGCT GATTGAGTTG TCTCGCGATG AATCTTGGCA TCTTTCTCGG GCCGAGTTAC AAGTGCTCAC GTTATTGCTT GAACACCAAG GTCAGTTAGT TTCAAAGCAC ATGCTAAAAA CGGGAGATGG GCAAGGTCCG CCATTAACCG ATGCCTCTGT GTCCCGCGCC ATATCCACGC TCCGCTCCTT TCTAGGCCCT CAGCACGAGG GCTTGATCGA AACCGTTAAA GGCCAAGGTT ATTTATTGCG GCCATCAAAC GGCAGCGAAT ATCGAGGCGT CAATTACCTC AGACTACACA CTGTGCCTTT GTGGAGTGCC TTAGTGTTAT TCGGGGTGAT GTTGGCGTTT TCGGTGTTTT ATCTGAAACA CACAGATCAC AGCAAGCCTA CCCAAGCTTT GATGACGTCG ATACTGTCGT TAGCCTCTGG TCAGCAAGTG CGCTTGAACT TATATGCCGA CTCCAGTGCG AGTAACACCT TACTGTTCGA AATGGGCGAG CGCTTAAGCG CGGGCCTCAT TGCCTGTGGC AAGAGCGATT GGGCGGATGT TTATGCGTCT TTATCCCATG ACAAACAGGT GCTTAATATG ACGTTTCGCG GTGAAAAACT CGACCAGTCA GTGCTCCGTA ATATTAGCAT CAGCGATTTT TCTCGCCCCA AAGCATTCAT CGACTCTGCC TGGCTGCGCG AGGTGGATAT CTGTGGCTAA
|
Protein sequence | MCMQLGDCRF DRERGMLIEL SRDESWHLSR AELQVLTLLL EHQGQLVSKH MLKTGDGQGP PLTDASVSRA ISTLRSFLGP QHEGLIETVK GQGYLLRPSN GSEYRGVNYL RLHTVPLWSA LVLFGVMLAF SVFYLKHTDH SKPTQALMTS ILSLASGQQV RLNLYADSSA SNTLLFEMGE RLSAGLIACG KSDWADVYAS LSHDKQVLNM TFRGEKLDQS VLRNISISDF SRPKAFIDSA WLREVDICG
|
| |