Gene Sbal223_3138 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_3138 
Symbol 
ID7087916 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp3718668 
End bp3719657 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content48% 
IMG OID643462022 
Productcobalamin biosynthesis protein CbiB 
Protein accessionYP_002359046 
Protein GI217974295 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1270] Cobalamin biosynthesis protein CobD/CbiB 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.645518 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACACCT CTTTTTATCA ACAACTTGTC GAGATAGATG GCGCTTTGTT TGAAGGCTTT 
TTGGTACTTT TTTTTGCTTT GTTATTGGCG CGGTTAGCGC CATTACCACG GGAAATGCAG
CCGCTTATTT GGTTTGGCCA TTTAGCTAAG CAACTCGCCG CTAAGGTAAA TCGCCCAGAA
CGCTCTCCAA GCCAACAAGC CACAGCAGGC TTTTTAGCTA TGATGCTGTT ACTGTTTCCG
TTTTGGGCCA TTATCACCTT TTTGCTCGAA ATGGCCGCCT TTCCATGGTT TTTCGAATTT
TTGGTGCTTT ATCTATGCTT AACCGATGCA GGGTTTAGCC AAGTCGCCGA TGAAATCGCT
AAAGCCTTAA AACGTGGAGA CAATGCCAGC GCAAAAAAGC TTTTACAGCC TTGGGTAGTG
CGCGATACCG ATAGCTTGTC GGAAATCGGC CTAGCCAAAG CCACCATAGA AAAACTCGCC
ACAGCGCCTA TTTACGGCAC AGCATTGACC ATTTTCTTTT TCGCTATCGC CGGAGCACCG
CTAGTGCTGG CGGTGCGAAT GCTCAAACAA CTCGAATTAA GCTGGCCGCC CATTCAGCCT
AAGTATCAAC ATTTTTGCAG TACTGTGAAT GGCGTATCGA CCATATTACT AGCGATCCCC
GCTTGGCTGT GGAGTCTATC AATTGCCATT CAAGGCGGTC CTAAGGCATT CGCTAAGCTA
TTTCGTACGC CGAAAAATCA TCCCGCGATT CGAGGCTATA TCCTCAGTGT GAATCTGGTG
GCGAGTATTT TACGCATCGA ACTCGGTGGA CCTCAAAAGT TTGCTGGCGT GCGTATCAAT
GTGGACAAAC TAGGTTATGG TCCGCAGCCG ACCAGTGATG CCATCGCCCC AGCAATCAAG
CTGACCTCAC GCGCCTGTGC CATCTGGTTT AGCTTTATCA TTATCCTGCC CTTGTTATGG
GCAGGTTTAC GTTGGTTACA TAGCCTGTGA
 
Protein sequence
MHTSFYQQLV EIDGALFEGF LVLFFALLLA RLAPLPREMQ PLIWFGHLAK QLAAKVNRPE 
RSPSQQATAG FLAMMLLLFP FWAIITFLLE MAAFPWFFEF LVLYLCLTDA GFSQVADEIA
KALKRGDNAS AKKLLQPWVV RDTDSLSEIG LAKATIEKLA TAPIYGTALT IFFFAIAGAP
LVLAVRMLKQ LELSWPPIQP KYQHFCSTVN GVSTILLAIP AWLWSLSIAI QGGPKAFAKL
FRTPKNHPAI RGYILSVNLV ASILRIELGG PQKFAGVRIN VDKLGYGPQP TSDAIAPAIK
LTSRACAIWF SFIIILPLLW AGLRWLHSL