| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_2970 |
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| Symbol | |
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| ID | 7089038 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | - |
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| Start bp | 3505872 |
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| End bp | 3507545 |
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| Gene Length | 1674 bp |
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| Protein Length | 557 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 643461855 |
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| Product | periplasmic/7TM domain sensor diguanylate cyclase |
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| Protein accession | YP_002358879 |
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| Protein GI | 217974128 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0804565 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAAAC TTAAACAAAC CCTATTTTGG TGTTTTTTAC TTTTTATATG GACATTAAGT
CCCTCTGTAT TAAGCGCTGA AATTGCGTTG GACTCGCCGT ATTTGTTCCA TGCTCAAGCG
GATCAACAGC CCCCAAAACA GTTTGATGCC GTGCCCCATT GGATGGGCCA ACTCGACGAA
GCTAACTCTG TGAGTTTAAC CGGCGGTGAC TATTGGATGA TCACGCCTGT GATGGTCAAT
CAACGTCAGT CGAATTGGGT AGTGGATGCG AGTAATTCGA TTATCGAATC CGTAGATTAT
TGGATACTCG GCAGTGATGG CAGTTCGCAA CATGCCCATA GCGGCTACAG TGCCCCCTAC
GAATTTTTAT TTGATTATGG CCGCAAGGTC ACCTTGAATA TGGGGACGGA TTATTGGCTA
TTGGTTAAGC TCAGTAGCCG TTATTATTCA TCGCCTCCCG AGATTGCCCT GCAAAGCGTG
ACGGATCATC AGTTGATGTC TGATCGCCTC GCCATGGCAG TGCTGCTGTG CTTAGGCGGC
TTATTGTTTA TCGCCTTATA TAATCTTCTG ATTTATATCT CTATTCTCGA TAAAGCTTTT
CTTTATTATG GCCTTTATGT CTTCGCGTAT TTTGCTGGCT GGGCACTGAC CTTCCATTTG
CCGGCGCACT TGTTTAATTT CCATTACCTT GAGTTACACC ATCTATTCTT TATCAGTTTA
CCGATTTTTA ATATCATGTT TTACAAGCAC TTCTTGCAGC TGCCTAGCTA CTCACCACGA
TTGTGGCGCC TCAGTCAGTA TTTGATGTTT GCTTGTATTG TTGCTTTGCC GACCAGTATT
TGGTTGTTGC CCTATACGGC GATTATTGCC TCAGTGCTGA TCATGTTGTG GATTGCCTTA
GCGATTACCT GCGGTAATGT GTGCTTGATG AAAGGCTTTG CCCCAGCGCG TTATTTTATT
CTCGCCTTTA CTTGTTTACT CTTGCCTGCG GTGATTATTT TGCCCGGGAA TATGGGGCTA
ACCCCTGACT TTATTGAACA TGCTGAACTG GCGACGCTGA TGGGCGGTAC GGCTGATGCG
CTGCTGTTGT CCTTAGCGTT AGCGAATAAG CTTAAGTTAC TCGCAGAGGA ACGTAAGGCG
CATATTGAAG AGCTCGCAAT TGCGTGGGAA AAAGCCCGCT TAGATGGCTT GACCCGAGTC
GGCAATCGTT ATGCTTTTGA TGAATATATG AATTCTCAAT TAGGCTTCGC TGATAAAGTG
GTGCAGCCTA TGGCTTTAGC TCTATTGAAT ATCGATAGCC TGAAAAGTGT TAACGAAACG
CTCGGCCATC AAGAGGGCGA TAGATTACTG CAATCGATAG TGCAGTTATT GCAAGCAACG
GACTTAGCGC ATTTAAAGCT TTATCGTATT AGTGGTGATG AGTTTGTGGT TGTGACGCCT
TCGGTGGGGA TCCCGCTATT GCTGAGTTCG TTAAATGGGT TAGGTGAACA ATTAGCTAGC
CAAGGCTTTA AGGATTGTCA GTGCAGTTTT GGGATCTCGT TAAACTCTGA GGTGGCCGAT
CCCCATGAAT GGCTGCGTTT GGCAGACACT AACTTGTACC AATCACGAAT GGATAAGCGC
CGCCAAGAGT ATGCCGATAC TCGCGGGGTC GATGTAAGAC TACATTTAAG CTAA
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| Protein sequence | MNKLKQTLFW CFLLFIWTLS PSVLSAEIAL DSPYLFHAQA DQQPPKQFDA VPHWMGQLDE
ANSVSLTGGD YWMITPVMVN QRQSNWVVDA SNSIIESVDY WILGSDGSSQ HAHSGYSAPY
EFLFDYGRKV TLNMGTDYWL LVKLSSRYYS SPPEIALQSV TDHQLMSDRL AMAVLLCLGG
LLFIALYNLL IYISILDKAF LYYGLYVFAY FAGWALTFHL PAHLFNFHYL ELHHLFFISL
PIFNIMFYKH FLQLPSYSPR LWRLSQYLMF ACIVALPTSI WLLPYTAIIA SVLIMLWIAL
AITCGNVCLM KGFAPARYFI LAFTCLLLPA VIILPGNMGL TPDFIEHAEL ATLMGGTADA
LLLSLALANK LKLLAEERKA HIEELAIAWE KARLDGLTRV GNRYAFDEYM NSQLGFADKV
VQPMALALLN IDSLKSVNET LGHQEGDRLL QSIVQLLQAT DLAHLKLYRI SGDEFVVVTP
SVGIPLLLSS LNGLGEQLAS QGFKDCQCSF GISLNSEVAD PHEWLRLADT NLYQSRMDKR
RQEYADTRGV DVRLHLS
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