| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_2738 |
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| Symbol | |
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| ID | 7087117 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | + |
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| Start bp | 3213020 |
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| End bp | 3214111 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 643461625 |
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| Product | sigma54 specific transcriptional acivator, PspF, Fis family |
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| Protein accession | YP_002358649 |
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| Protein GI | 217973898 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3604] Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains |
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| TIGRFAM ID | [TIGR02974] psp operon transcriptional activator PspF |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.509695 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.150026 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGATAATA AATTTCAGCA AGACAACCTT ATCGGTCAAT CCAACGCCCT ACTCGAAGTG
TTAGAACATG TGTCGCAAAT AGCGCCGCTG TCTAAACCCG TACTGATTAT TGGTGAACGT
GGCACAGGTA AAGAGCTTAT TGCCGAACGC TTACATTATC TGTCTAAGCG CTGGGATCAA
AGTTTTATTA AGCTAAACTG TTCATCTTTG AGTGAAAATT TACTCGAGAG CGAATTGTTT
GGCCATGAGT CAGGTGCCTT TACTGGCGCC AAAGGCAAAC ACGAAGGTCG CTTTGAGCGC
GCCGACGGCG GCACTTTATT CCTCGACGAA TTAGCCAATA CCTCAGGACT TATCCAAGAA
AAGCTTCTGC GCGTCATTGA ATACGGCGAA TTTGAACGAG TCGGCGGCAG TAAAACCGTG
CAAAGTGATG TTCGTTTAAT CTGCGCCGCC AACGAAGATC TGCCCTCACT TGCTGACGCA
GGCGAATTTC GTGCCGATTT GCTCGATAGA CTCGCCTTCG ATGTGATCAC TCTGCCACCG
CTGCGTTGCC GCCCAGAAGA CATAATGACA CTAGCGGAAT ACTTCGCCGT TGGCATGGCA
CGCCAATTAA AGCTACAACT GTTCAGCGGT TTTAGTGCCC ATGCGGTCGA GCAACTAATG
ACCCACGACT GGCCGGGCAA TATCCGAGAA CTTAAAAACG TGGTCGAGCG CAGCGTTTAC
CGTAATGGTG GTGAAAATCG GCCCATCGAC CATATCACCC TTGATCCATT TGCTTCGCCC
TATCGACCTA AAACTCGGAT CAAGACCCGC GAACGTCAAA TCACCTCAGT CGCGCCAACA
ACCCTTGCCA GTACGCCGCA ATCTGCGCCG ATACTTGAGG CTGAAGTACC AGTCAATACT
GAGTCTTCAG TGAATAGCTT TAATTTTCCG CTGGATTTTA AAGAGCAAAC TGAGAAGTTT
GAGATGGATC TTATCCAGCA GGCACTCTCA AGCAGCCAAT ACAACCAAAA GAAAACCGCC
GACATGCTCG GATTAAGCTA CCACCAACTG CGTGGGATCC TTAAAAAATA CAATTTACTT
GATAAAGCAT AA
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| Protein sequence | MDNKFQQDNL IGQSNALLEV LEHVSQIAPL SKPVLIIGER GTGKELIAER LHYLSKRWDQ
SFIKLNCSSL SENLLESELF GHESGAFTGA KGKHEGRFER ADGGTLFLDE LANTSGLIQE
KLLRVIEYGE FERVGGSKTV QSDVRLICAA NEDLPSLADA GEFRADLLDR LAFDVITLPP
LRCRPEDIMT LAEYFAVGMA RQLKLQLFSG FSAHAVEQLM THDWPGNIRE LKNVVERSVY
RNGGENRPID HITLDPFASP YRPKTRIKTR ERQITSVAPT TLASTPQSAP ILEAEVPVNT
ESSVNSFNFP LDFKEQTEKF EMDLIQQALS SSQYNQKKTA DMLGLSYHQL RGILKKYNLL
DKA
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