| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_2675 |
|---|
| Symbol | |
|---|
| ID | 7089960 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | - |
|---|
| Start bp | 3143891 |
|---|
| End bp | 3146242 |
|---|
| Gene Length | 2352 bp |
|---|
| Protein Length | 783 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 643461564 |
|---|
| Product | DNA internalization-related competence protein ComEC/Rec2 |
|---|
| Protein accession | YP_002358588 |
|---|
| Protein GI | 217973837 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2333] Predicted hydrolase (metallo-beta-lactamase superfamily) |
|---|
| TIGRFAM ID | [TIGR00360] ComEC/Rec2-related protein
[TIGR00361] DNA internalization-related competence protein ComEC/Rec2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.923098 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.0587505 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATCGAT TCATGTTTGG CTTTAGTGCC ATCTTGTTAT CAGCGATGTT GTGGCCTTCG
CTGCCGCCAG TCCGTTATAT ACCCTACCTT GCTGTTGGGG CGTTAATTTT ATACCGAAAA
ATCCCTGTCT GCGCAGGTGG ACTCTTTGCA ATGGCATGGC TAACTGGTTT TTGCTTAGGA
TTATCTAGGC AGGATCTTCC AGTGTTACAA CAACCTATAC AGGTTAGGGG CGAAATCATA
TCACTAGTTA GTCGAAACAG CGACTGGCTA AGTTTGGATA TATCGGTCAT TAAACCAAAT
TTAATCTTAG GGCCAAATGC AAAATTGCGA CTCACGTGGA AAGATCCGCC AGAAGTCGAT
GTCGGTCAGG TTTGGCAGTT TACCTTGATG CCTAAGAGTA TTGCTAGCGT GTTAAATCAA
GGTGGCTACA ACGAGCAGAA ACAATTAATC AGCCAACATG TTGTCGGTAA AGGGCGAGTG
ATAGAGGCAC ATTTACTTGC GGTTTCACCT TCACTGCGTA ACGAGCTAAT AAGCGCATTG
ACGCCTGAAT TAGCCTCTTT GCCGCAAGGT GATATTCTAC TCGCCTTACT TTTGGGTGAT
AAGCAGTTGA TCTCAAAAGT GCGTTGGCAA GCATTACGAC AGACAGGTAC GGGTCATTTA
GTGGCGATAT CTGGCTTGCA TCTTTCGGTC ATAGCAGCAT GGATTTACAC ATGCCTTTTG
TTTGGCTTAA GTCGCTTAGT GCCACATCAG AGTCGGCGTA ATATCACCCT TGCCTTAGTC
GCAGCGGGCA TAGGCGCCGC ATTTTATGCC TATCTTGCTG GCTTTGGCAT TTCGACGCAG
CGTGCATTAG TGATGATTCT GCTGTTAATG CTGTTGAGTT TATTAAAGCG CTTTTCTACG
GCGTGGGAGC GCTTATTATT CGCCCTGTTC ATTGTATTGC TGCTTGATCC GCTCGCTTGT
TTAAGTGCGG GATTTTGGCT GTCTTTTTGT GCCTTAGGCA TCATCTTATA CACCTTAGAA
ATCCAACCAA GGGCATTTAC CCCTGCGTCC ACTCGAAGGG CGCGTTTACG CACAGGGATG
ATGCAGTTTT GGGCTATCCA ATGGCGCTTA AGTCTCGGGC TTGGATTACT GCAAGCGGCA
CTCTTTGGCG GCGTGAGCGT ACACAGTCTG TGGATGAACA TCTTGGCGGT GCCTTGGTTT
AGCTTTGTAG TGATCCCCTT AGCCATGGCG GGATTTGTCT GCTGGTGGCT TGGGACGGCT
TTGGGATTAT CTCACTTCGG ACTCTCTTCG CTTGGAGGAC TGCGCCTCAG TGATTGGAGT
TTATCGCCCT ATGCGCAGTT GCTCGACATC AGTCAGCAAT TACCTGCCCA TTGGTTAGCA
CTCTCTGACA GCTTATTAGC CTTAGGATTC TACGCGCTCG TTGGTGGTGT TTTATGGCGC
TATGTGCCTA AGCATAAAAA CTATATTGCT TGGTTAAGCC TCTTGAGTTT GCTGTTTATG
CCTGCTTTAC TTTTTTGTAT GACGCTATGG TCTCCCGTTC AAACCCATCG ATGGACCATG
CATTTACTCG ATGTGGGCCA AGGTTTAACC GTGGTGATTG AAAAGAATGG CAGGGGTTTC
ATCTATGACA CGGGCGCCGC CTTTGGTGAT GATTTCAGTT ATGCGGAGCG GGTGATATTG
CCCTTTTTAA AAGCCAAAGG CATCCAAGAG ATTGATTATA TTGTTATCAG CCATAGCGAT
AACGATCATG CTGGCGGTGC GCCTGTCTTG ATTGAGGCTT ATCCCAAGGC TTTGGTGATC
ACAGATGTGG CTGGCTTTAG CGGCCAAGAT TGCCGTCCAA GGCAGATTCA ATGGCAAGGA
TTGCGCCTTA ACTTACTCTC TCCGCCTCAA GTGCTGGCGG GCAATAATGG CTCCTGTGTG
GTGCGCATTG ATGATGGCCT GCAAAGTCTG CTACTCACCG GGGACATTGA AAAACAAACC
GAAGCGGTAC TATTACGTAG TGAGTTAAGC GTGAACGGTG ATCTAAGTGA CCTAAACGAG
TTACAAAGCG ACGTGCTGGT GGCGCCGCAC CATGGCAGTA AAACCTCGTC GACGGAGGAC
TTTATCGATG CCGTTGCCCC TAAGTTAGTG CTGTTTCCGG CGGGTTTTGC TAATCGCTAT
GGTTTTCCTA AATCCACAGT GGTTGAACGT TATCAGCGGC GAGAGATTAG GAGCCTGACC
ACAGGGTCAG AAGGGCAGAT TAGTGTGATT TTTCAGCAGT CTGAGTTAGA GGTAAAGACC
TATCGTGGTG ATTTAGCGCC ATTTTGGTAC AACTCTCTGT TTAGATTTGG TGACTTGATT
AATCCAGAGT AG
|
|---|
| Protein sequence | MNRFMFGFSA ILLSAMLWPS LPPVRYIPYL AVGALILYRK IPVCAGGLFA MAWLTGFCLG
LSRQDLPVLQ QPIQVRGEII SLVSRNSDWL SLDISVIKPN LILGPNAKLR LTWKDPPEVD
VGQVWQFTLM PKSIASVLNQ GGYNEQKQLI SQHVVGKGRV IEAHLLAVSP SLRNELISAL
TPELASLPQG DILLALLLGD KQLISKVRWQ ALRQTGTGHL VAISGLHLSV IAAWIYTCLL
FGLSRLVPHQ SRRNITLALV AAGIGAAFYA YLAGFGISTQ RALVMILLLM LLSLLKRFST
AWERLLFALF IVLLLDPLAC LSAGFWLSFC ALGIILYTLE IQPRAFTPAS TRRARLRTGM
MQFWAIQWRL SLGLGLLQAA LFGGVSVHSL WMNILAVPWF SFVVIPLAMA GFVCWWLGTA
LGLSHFGLSS LGGLRLSDWS LSPYAQLLDI SQQLPAHWLA LSDSLLALGF YALVGGVLWR
YVPKHKNYIA WLSLLSLLFM PALLFCMTLW SPVQTHRWTM HLLDVGQGLT VVIEKNGRGF
IYDTGAAFGD DFSYAERVIL PFLKAKGIQE IDYIVISHSD NDHAGGAPVL IEAYPKALVI
TDVAGFSGQD CRPRQIQWQG LRLNLLSPPQ VLAGNNGSCV VRIDDGLQSL LLTGDIEKQT
EAVLLRSELS VNGDLSDLNE LQSDVLVAPH HGSKTSSTED FIDAVAPKLV LFPAGFANRY
GFPKSTVVER YQRREIRSLT TGSEGQISVI FQQSELEVKT YRGDLAPFWY NSLFRFGDLI
NPE
|
|---|
| |