Gene Sbal223_2288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_2288 
Symbol 
ID7086415 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp2715857 
End bp2716954 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content49% 
IMG OID643461186 
Productprotein of unknown function DUF58 
Protein accessionYP_002358210 
Protein GI217973459 
COG category[R] General function prediction only 
COG ID[COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.523334 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAACGAC TGATACGCCC TACTTTCGTT CCGACTCTAG TACCGATTTG GCAGCGTTGG 
TTAGCAAGGC GTTTACCACC GAGTCCTGAA ATCACCTTAA GCCATCGCAG CATTTTTATT
TTGCCGAGCG GTTTTGGCTT AGTTTGGCTC GGGTTGGTTT TACTCTTATA TCTATTTGGC
ACTAACTATC AAAATAACTT AGTCATTGGC CTTAGCATCT TATTATTAAG CCTGTTTAAT
ACCTGTATTC TCTACAGTTA CAAAAATCTG GCGGGTCTAC ATTTACGCGC CATGACGCCG
CCCGAAGTCT ATGCGGGAGA GACCTTAACC TTTCCGGTCC TCATCAGCAC CCATCACAGT
GGCCATAATA TTCAGCTTAA CTATCCGCAT AATCGCACTT ATACGGTGCA GAACATCGGC
ACAGATGAAC AGCAAGCGCT CGTGCCCTTC GAATATCATC AGCGGGGCCA AGTGTCACCG
GGTCGGCTCA AAATTGAATC CTTCTATCCC TTAGGGCTTT GCCGCGCATG GTCCCATGTG
GATTTGGCCA TTAGTCACTT AGTCTTTGCC CAGCCGATTG AAGCGCCGCT GCAACTTGAG
GCTGATCATA CTCAGTCTGA GCAAGATCCT CTGCTACTGG CGGGTAAACA TGTGTCAGGC
ATCGATGAGT TTAAAGGACT TAAACCCCAT GTGCTCGGCG AGTCCCTCAA GCAAGTGGCG
TGGAAACAGT GGGCGCAGGG TCGCGGCATG TTAAGTAAAG AATTTCAGCA GCCCCAAGGC
GATCCCGTCT GGTTAAGACT CAGACCTGAT GCTAAAAGGC TCGAAACCCA GTTGAGTCAA
TTAAGCTGGC AAATCAATAA ACTCACGCAA CTCGAGCAAT ATTTTGGCCT ACATCTGCAA
ACACCAATGG GCGAGGATAT ATTGATCGCG CCCTCTATCG GTCATAACCA TAGAATCGCC
TGCCATAAGG CCCTTGCCTT GTATCCACAG CTAGCGCCGT CAGCCGTTAA TTCGTCATCA
GCGGTAAAGC ACTCAAATAA AACGGCTAAA ACCACCAGCA AGAAACGTCA TATCCCGACC
TCGAGGGAAC AGGCATGA
 
Protein sequence
MKRLIRPTFV PTLVPIWQRW LARRLPPSPE ITLSHRSIFI LPSGFGLVWL GLVLLLYLFG 
TNYQNNLVIG LSILLLSLFN TCILYSYKNL AGLHLRAMTP PEVYAGETLT FPVLISTHHS
GHNIQLNYPH NRTYTVQNIG TDEQQALVPF EYHQRGQVSP GRLKIESFYP LGLCRAWSHV
DLAISHLVFA QPIEAPLQLE ADHTQSEQDP LLLAGKHVSG IDEFKGLKPH VLGESLKQVA
WKQWAQGRGM LSKEFQQPQG DPVWLRLRPD AKRLETQLSQ LSWQINKLTQ LEQYFGLHLQ
TPMGEDILIA PSIGHNHRIA CHKALALYPQ LAPSAVNSSS AVKHSNKTAK TTSKKRHIPT
SREQA