Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_2285 |
Symbol | |
ID | 7086412 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 2711792 |
End bp | 2713717 |
Gene Length | 1926 bp |
Protein Length | 641 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 643461183 |
Product | Lytic transglycosylase catalytic |
Protein accession | YP_002358207 |
Protein GI | 217973456 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.014604 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGCAAAG CCGTGATGAA TGTGGTTATA TCCAGCGCAA TATTGCTCGC AGGCGCCTTG AATGCCCCTT CTGCATTCGC GTTAACGCCA ACGCAGAAAA CCTTCCTTGA GGCCGAAAAA GCCTTAAAGA AACAAGACTA TGAAGTCTAT AAACCCCTAC GGGCAAAATT GGGCGATTAT CCGCTGGCGA TTTACTTAGA CCATGATATC GACATCGGCG ATCTCAATGG TTTGCATGGC GCTGCGGCAA AAAATCTGAT TGATAAGTAT GAAACTACGC CTATGTACAA CAGGTTAAGG TCTAAATACT TAAACAATGC GGGCACCCAA AAACGCTGGA GTGATTATCT TGCGATAAGC CCCGATGTCC CTACCGACAT CCGCCTGCAA TGTTATTACT ACGAAGCAAA ACTTGCCAAG GGCGAGATAA AAACCGCCTA TGCGGCGGCG CAATCACTCT GGGTCTTTGG TAGTTCACGG CCAAAAGAAT GTGACCCCCT GTTCAACGCT TGGACCAAAG CGGGTAAACG CACTCAAGAT GTGATCTGGG CGCGGATGAT GCTGAGTTTT GAGACTGGCG AAACCAGTCT GCTGAGCTAT TTATCCCAGA AAATCACCAC CCATAACAAC GAAGCGAAGC GGTTAGTCGC CGTCTATAAA GATCCAAACA GCCTGCGCCA TACCGAAAAG TTTAAGGATA AAAATCCGAT TGTGGGTGAC ATAGTCGCGG CGGGATTAAA ACGCCTTGCC CGCAAGGATC TCGACCAAGC GATTAATTTG TATGAACGGT ATCAAAAGGC TAATCGTTTC ACGCCAGCAC AAGCCCAACA ACTGGATAAA TACTTAGTTC GCCGCATCTT AATCGAACAA GATGATAGCC ATAAAAGCTA TGTCGACAAT GTGCTGGCCG AGCTGAAAAG TGACGACTTA TTTGAACGCC GGTTAAGATG GGCCATTCGC GATCACGACA TGCGCAGCAT TGCCCGTTAC TTAAATTTAC TGCAACCAGA AACCTTGGCT AAGGAGCGCT GGCAATATTG GCTCTATCGC ACGAATGCTA AAGATGCGCC AGAAAGTGCC ACTAAGGCTC TTGCGACAAT CAGCAATGAA CGTAATTTCT ATGGTTTTGC CGCCGCGCAG TTTTTAAATA AACCCGTCTC GCTGAATCAA AGCCCTGAGC CTGTCGTCGA CGCCAGCAGC CAAAAATTAA CCGATGATGT GGGTTTTGTG CGCGTGCAAG AGCTAATGGC GCTGGATCGT TATTTCGATG CACGTTACGA ATGGATGTCG CTGCTCAGAC GCAGTGACAA CACTATGCGA GCCCGTTACG GCCGTTATGC CCATGAGCAA GGCTGGTATG ACTTTGGTGT CGAAGCCAGT ATTCAAGGTA AGTTGTGGGA TGACATTCCC TTACGCTTCC CGATGGCGCA CCAAGAAGGT TTTGAGCACG CCAGTCAAAA GCACAAAGTG AACATAGATG AGATTCGAGC GATCAGTCGC CGCGAGAGCG CGTTTTATCT TTATGCGACC TCAGGCGTCG GTGCCCGCGG CTTAATGCAA ATTATGCCTG CGACCGCTAA AGCAACCGCC AAGAAACATG GGGCTAAATA TAGCGATCCT AAGGATCTTT ATAGCGCGGA GCTTAACCTC AATCTTGGCA GTGCTTACTA TGCCCAGTTG TTGAAAGAGT TTAACCAGAA CCGTATCCTC GCCACAGCCG CCTATAACGC CGGTCCGTCA CGGGTGCGTC GCTGGTTGGC AAACTCAGAT GGTAAACTCG ATGCCATGGG CTTTATCGAA GCCATTCCCT TCACTGAGAC CCGTGAATAT GTGCAAGCCG TCTTCAGCTA TCGATTGATT TATGAGGCGC AGGAGCAAAA AGCGCAGCCA TTATTCAGCG AAGCCGAACT GAAGTTTGCT TACTAA
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Protein sequence | MCKAVMNVVI SSAILLAGAL NAPSAFALTP TQKTFLEAEK ALKKQDYEVY KPLRAKLGDY PLAIYLDHDI DIGDLNGLHG AAAKNLIDKY ETTPMYNRLR SKYLNNAGTQ KRWSDYLAIS PDVPTDIRLQ CYYYEAKLAK GEIKTAYAAA QSLWVFGSSR PKECDPLFNA WTKAGKRTQD VIWARMMLSF ETGETSLLSY LSQKITTHNN EAKRLVAVYK DPNSLRHTEK FKDKNPIVGD IVAAGLKRLA RKDLDQAINL YERYQKANRF TPAQAQQLDK YLVRRILIEQ DDSHKSYVDN VLAELKSDDL FERRLRWAIR DHDMRSIARY LNLLQPETLA KERWQYWLYR TNAKDAPESA TKALATISNE RNFYGFAAAQ FLNKPVSLNQ SPEPVVDASS QKLTDDVGFV RVQELMALDR YFDARYEWMS LLRRSDNTMR ARYGRYAHEQ GWYDFGVEAS IQGKLWDDIP LRFPMAHQEG FEHASQKHKV NIDEIRAISR RESAFYLYAT SGVGARGLMQ IMPATAKATA KKHGAKYSDP KDLYSAELNL NLGSAYYAQL LKEFNQNRIL ATAAYNAGPS RVRRWLANSD GKLDAMGFIE AIPFTETREY VQAVFSYRLI YEAQEQKAQP LFSEAELKFA Y
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