| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_2270 |
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| Symbol | |
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| ID | 7086397 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | + |
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| Start bp | 2692624 |
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| End bp | 2693220 |
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| Gene Length | 597 bp |
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| Protein Length | 198 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 643461168 |
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| Product | Rhomboid family protein |
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| Protein accession | YP_002358192 |
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| Protein GI | 217973441 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00653341 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.491355 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACACGCA GTCCCTATTG GGTCGCGCTG ATAGTGAGTC TGATATGTGC GGGTTTGTAT
GTCGCAGGCT TAGCCAGTCC TGCTGTCGAC AACCTGCTCG CCTATCGCCG CAGTGCTATT
GCTGATGGTG AATGGTGGCG CTTAATCAGC GGTAATTTAC TTCACACGAA TCAGTGGCAC
CTGTTGATGA ATCTTGCGGG TCTTTGGGTT GTGCTGTTTT TGCATCATTT CCATTACCAT
CTCAAAGGCT TAAGCGCACT ATTCCTCGTA TTATGTTTAC TAGAAGGCAT AGGCTTATAT
TTGGGCTACC CGCAATTGCT CGGTTATGTC GGCTTAAGCG GTATGTTGCA TGGCTTATTC
GCCTTCGGCG CGGTTCAGGA TATTGTCCGC AAGCTGCGCT CAGGCTATCT GCTGTTACTT
GGCGTTATCA TCAAGGTTGG CCACGAACAG CTTTATGGCG CCAGCAATGA TGTCACCGCC
ATGATAGGCG CGCGCGTGGC AACCGAGGCG CATTTGGTCG GTTTAATCTG TGGGCTGATT
TGTGCTTTAG CGGTATTTAT CAAGCTAAAG TTTCGCCACG TAAAAGCCTC TGCGTAA
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| Protein sequence | MTRSPYWVAL IVSLICAGLY VAGLASPAVD NLLAYRRSAI ADGEWWRLIS GNLLHTNQWH
LLMNLAGLWV VLFLHHFHYH LKGLSALFLV LCLLEGIGLY LGYPQLLGYV GLSGMLHGLF
AFGAVQDIVR KLRSGYLLLL GVIIKVGHEQ LYGASNDVTA MIGARVATEA HLVGLICGLI
CALAVFIKLK FRHVKASA
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