Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_2210 |
Symbol | |
ID | 7086337 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | - |
Start bp | 2625607 |
End bp | 2626902 |
Gene Length | 1296 bp |
Protein Length | 431 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 643461108 |
Product | integrase family protein |
Protein accession | YP_002358132 |
Protein GI | 217973381 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.241483 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.683218 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAACTTT CTCCAGTAAT CCCGCTATTT GACTCATTTG AATTCATACA AGTTGGCAAT AGTGTTGTTA ACCAATATAT CACCCAAATC AGCATGAAAA AGGTGGCTGA TGCGGGCTTA GTGATCGAAC ACGCCAGTGA TTGGTTGTTT GAACAAAAGC ACAACGAAAA CAACTATAAA GCCTATCGCA GCGAGCTCAC TACATTTCTT CATTGGTGTT TTGATGTGGT TTCAATGTCG CCCATAGAAG TCACACGCAA AGACATGAGC CATTACGTGG ATTACTGCCA GACGCCGCCC ATAGCACTAA TTGGCTATTT TAATGTGCCA CAATTCAAGC TCGATAAAAT GCGTGATGAA CGGGTTCCAA ACCCACAGTG GCGGCCATTT GTCGGTAAAA AGCGACTCGG GCAAATCCAG CCTTATGCGT TAAGTGACAA TGCGTTAAAA ACGAAAATGG CCATTTTGTC TTCGTTTTAC TCGTACCTGA CAAGTGAAGA ATATTGTGAG CGTAATCCTG CACAAATTTG GCTGAATCAC AGTCGATTCG CGGCCAATCG GCAATATCAG CGTCAACATC ATGAAGATGA TAACAGTCTC GCATTCACTG AATTACAGTG GTCATACATT ATGGCGACCG TAACAGCGTT GGCAGAAACA TCGCCGGAAT TACATCAAAG AAGCTTATTT CTGATTTCAT TGATCTATTG TTGCTATTTA CGTATCTCAG ATGTGTCTGC ACGCGCAGGT TATTCACCGG TGATGGATCA GTTTAAGCGT AATCAACAAA CGGGTATTTG GAGTTTTCAT ATTCCATTGA GCAAAGGCGG TAAAAGGCGC AGCGTGGCAA TTTCCAAAGC TTTGCTCGAT GCTTTAGTTA AATATCGTCA GTTTTTAGGA TTAACAGATT ATCCAGCGCC AAACGAGAAC CATCCACTGT TTGTGCGGCA CAAAGCTGCT GGTCGCGGTC GAGATGTTGG CATCCTCAAT GCCAATCTCG GTATTCGCCA AGTCCGCGAT GAAATTCAAA GTATTATCAA TCTGGCAGCA GATAGTATTG AGGCCGATGG TTTTGCACAA GACGCCGCGC AGATGCGCAA ACTTACAGCC CATAATATTC GTCACACAGG CATCACACAC GATATCAATA TTAACCGCAG ACCGTTATCC CATGTACAAG CCGACGCTGG CCATGAGAGC ATTGACACCA CGTCACAGTA TTTGCACACA AGCCAAATAG AACGCCATGA AAGTGCATAC AATAAACCAA TCGACCATTT AAAAGGCATA GAGTAA
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Protein sequence | MQLSPVIPLF DSFEFIQVGN SVVNQYITQI SMKKVADAGL VIEHASDWLF EQKHNENNYK AYRSELTTFL HWCFDVVSMS PIEVTRKDMS HYVDYCQTPP IALIGYFNVP QFKLDKMRDE RVPNPQWRPF VGKKRLGQIQ PYALSDNALK TKMAILSSFY SYLTSEEYCE RNPAQIWLNH SRFAANRQYQ RQHHEDDNSL AFTELQWSYI MATVTALAET SPELHQRSLF LISLIYCCYL RISDVSARAG YSPVMDQFKR NQQTGIWSFH IPLSKGGKRR SVAISKALLD ALVKYRQFLG LTDYPAPNEN HPLFVRHKAA GRGRDVGILN ANLGIRQVRD EIQSIINLAA DSIEADGFAQ DAAQMRKLTA HNIRHTGITH DININRRPLS HVQADAGHES IDTTSQYLHT SQIERHESAY NKPIDHLKGI E
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