| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_2180 |
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| Symbol | |
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| ID | 7085986 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | - |
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| Start bp | 2595786 |
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| End bp | 2597165 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 643461079 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_002358103 |
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| Protein GI | 217973352 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0347307 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.00809884 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATAATT CAGGCTATCA AGCCAAACGT TTAATCCAAT TGGCGCTGCC GGTGCTAATA
GCTCAGGTCA CTCAGACCAT GATGGGCTTT ATTGATACCG TTATGGCGGG CCGTGTTAGC
GCGGTTGATA TGGCCGCTGT GGCGGTCGGC ACTAGCCTTT GGTTACCCGC TATTCTGTTT
GTCCAAGGTT TGCTGATGGC TTTTACGCCT TTATTTGCCC ACTATAATGG AGCGAATAAT
CAAAAAGCCA TCCAACCTTT GGCCTTTCAA GGTGCCTATC TTGCCATCAT TGGTGGCATT
GGCGTGATGA TTTTCCTCGC ATCAGCGCCC TTTGTGCTTG GCCATATGGA TTTAGAACCC
GAATTATACC GCTTAACCAT TGGATATCTC GACGGTATTT TATGGGGCGC GCCCGCATTT
GTGCTATATC AAGTGCTGCG CGGCTGTAGT GAAGGGATTT CTTATACGTT ACCAACTATG
GTCATTGGCT TTGTCGGCTT AGCAGTGAAC ATCCCCGCCA ACTACATCTT TATTTATGGA
CACTTTGGCG TACCTCCGAT GGGCGGTGCT GGCTGCGGTA TTGCCACCGC TTTGGTTTTT
TGGGCCATGC TGATTGCCAT GACGATTTAT ATGCAGCTGC ATAAGAAGTT CGCGGCCTTG
GCTCCTTTCA GTAAATTTCA TCGTCCTGAC TTTGAAACGA TGAAAAAAAT GACCAAACTC
GGCATGCCGA TAGCAATGGC GCTGTTTTTT GAAGTGAGTT TATTTGCCAT TATAGCGCTG
TTACTTGCAC CATTAGGCGC AACTGTGGTG GCAAGTCACC AGATAGCACT GAACTTTTCT
GCCATCGTAT TTATGCTGCC GTTATCTATT GGTATCGCGG TATCGATCCG AATTGGTTAC
TACTTAGGCC GTGATCTCGC CGATATTTCC GCAGTGGTTA CCAAAGTGGG TTTATGGCTG
GCGCTGTCCC TTGCATTATC AACTGCAGTC TTGACCGTCA TATTTAGATT CCAGATTGCA
GAGCTTTATA ATGGTGATCC AGAAGTTGTC GCTTTAGCCG GCAGCTTGAT GTTGATGGCG
GCACTGTATC AATTATCGGA TTCAGTCCAA GTGGTTGCCG CCGGAGCCCT ACGTGGTTAT
AAAGATACCC GCAGTGCCTT TTATATCACG CTGTTTTCCT ATTGGGGCAT AGGGATGTCA
CTCGGTTATA CCTTGGCTTA TACGGATCAT ATCGTTCCTG CCATGGGTGC CCATGGTTTC
TGGGCCGGAT TGATTGCAGG CCTCACCTCG GCGGCGCTGC TATTTTTCAT TCGACTGCGT
TACATCCAAA AACATGGCGT GCATTTAAGC CTCATCGATG GTGATATTGT GCATCATTGA
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| Protein sequence | MNNSGYQAKR LIQLALPVLI AQVTQTMMGF IDTVMAGRVS AVDMAAVAVG TSLWLPAILF
VQGLLMAFTP LFAHYNGANN QKAIQPLAFQ GAYLAIIGGI GVMIFLASAP FVLGHMDLEP
ELYRLTIGYL DGILWGAPAF VLYQVLRGCS EGISYTLPTM VIGFVGLAVN IPANYIFIYG
HFGVPPMGGA GCGIATALVF WAMLIAMTIY MQLHKKFAAL APFSKFHRPD FETMKKMTKL
GMPIAMALFF EVSLFAIIAL LLAPLGATVV ASHQIALNFS AIVFMLPLSI GIAVSIRIGY
YLGRDLADIS AVVTKVGLWL ALSLALSTAV LTVIFRFQIA ELYNGDPEVV ALAGSLMLMA
ALYQLSDSVQ VVAAGALRGY KDTRSAFYIT LFSYWGIGMS LGYTLAYTDH IVPAMGAHGF
WAGLIAGLTS AALLFFIRLR YIQKHGVHLS LIDGDIVHH
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