Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_2033 |
Symbol | |
ID | 7086867 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | - |
Start bp | 2401747 |
End bp | 2403609 |
Gene Length | 1863 bp |
Protein Length | 620 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 643460936 |
Product | hypothetical protein |
Protein accession | YP_002357960 |
Protein GI | 217973209 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0461575 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0000553349 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGTTAAAAC CCACTTTACT GGTTAGCCTG CTTGGCTTAA GCCTTTATGC TACGAATGCC GCCTATGCGG CGCCAAGTCC TGTTCCCCTC TTGGTTGAGC AATGTCTGCG TTTGCCAAAC ATTGAGCTCG CGTCAGCCTT CGCCAACGCG CGCTTAACGA CGGCGCAATT AACCTTGGCC CAGCGCGCGC TTATTTTTGA GCAACAGACG ATTGGGCTTA ATAATATCAA CGACAGGCTC AACTATTATC GTGGGTTTAA CTTACCGAGT GAAGAACGCG AAGGTTTACT GCAATGCCAG TTACACCTCG CCGATACCCT GTCGCAACTT CTCAACCAAG CAGAATTAAG CCAACTGGCT TACGCCTTAG CCCAAGGTAA TGCTGAACAA ATACTGTTGA GCCAACAGCT TAAACACTTG CTACAACAGC ATTGGAGCGC CGAGGAAAAA GCGAAACTGC ATACGGCGCA GGCCAGCATA GGCCAAGGGT TAGGCAGCCA ACAATTTAGT CTTGCCTTCA ATGACAGCCA ATGCCAACCC GAAGCGACTC TGCAGCAACA TCATCTGCAT GAAGAAGAGG ATAAAAGTGA CGAGCCGAAG CGCAGCAGTG CAAAGCAAAG CGATTTTTCG GGCACTATCG TCAGCTACTT ACTGACACAG GAAAACGCCG TATGTCGCCA AAATGTATGG CAGGCATACC AAGCCAGAGC GAGTGAAACC AATCAAACGG CATTACAGCG AATTGCAGAG CAGCGCCAAC AAGCCGCCAC TGCGGCAGGC TTTACCGATT ACAGCGCATT AGCGCTTAGT TCGCAGCAGT TATCATCCCC TGAGTTGGTC AAAGCCTTTC TTGATAGCCA AACCCAAAAT TTGCAAGTGG CTCCCTGGGA TATTGGACGT ACTCTGTCAC AACAAGCATC AGCCAAGGGC CCCACATGGC AGACCTCAGA CGTCTTGAGT CGCAGCTTTA CTTATCTGCA AGTGTTTGGT TTGCAGTTTG AGACCATAGC AACCGCCAAC GCCGAGAAAG CACCAACCGA TCCTAATCGG CCACATATCG TCAGGGTTTA CCACCAGCAA AGATTGTTGG GTGAAATCTA TGTGGCGTAC AACCATAATC CACAGCAAAG TAGTCAACAG CAGACATTGC GCCAAAGTGT ACTCGGCCAG CAATTTGGAC AACAGGCGTT GGATCTTAAG CCGCAGCTGA GTAACTACAA AGACATTGAA CAGTTAACCG AATCCATCGC AGAAGCAGTG ACTTCCCTTG CTAAAGCGAG CCATTTCTAC CTCAACAATG CCATGGGGCA GAGTCAGGAT AGCCATTTTG TGGCGAGTCT CTGGTTAGCT GAAGTGCTGC GCCATCAACT CTTTCCGCAA TTTGAGCAAA GCTATTTACA AGAGCGTGAA ACACTGGCTA AAGCTTATTC GAAACAGCTC AAAGTCTTTC GCGCTAAGGT TGCAGTCAAC TTTTATCAAG ATGTAAATTC ACAAGTCTAT CCGGATCTCG GTGCAGAGTT TAGTGCTAGC TTCGGCCAAA ATTGGCCGCA AACCAAGGAT TATCCCTACA GCTTCAATGC TATCGCCAAC GAAGGGCCGC TCTACTACCA ATCGCTCTGG CAAGTATCGT TAGCCCAGCT GATTGATCAA GCAACATTAG GCTGCCAAGA CAAACTTCAA TTATTCAATT TGTTAGTCGT CAATGAAGAC TCTTTAAACG TAAGTGAACA ATTGAATGCC ATCATTGGTG CGCCCGTTGA TAGCGCTTCG CTGATCCAAA GGATCTCCAA TAGCGCCGCT TCGGAGCATA CTGGTAATTC TGACAATCAA GCTTTCAACG CCACAGGTTC TTGTGCGTTT TAA
|
Protein sequence | MLKPTLLVSL LGLSLYATNA AYAAPSPVPL LVEQCLRLPN IELASAFANA RLTTAQLTLA QRALIFEQQT IGLNNINDRL NYYRGFNLPS EEREGLLQCQ LHLADTLSQL LNQAELSQLA YALAQGNAEQ ILLSQQLKHL LQQHWSAEEK AKLHTAQASI GQGLGSQQFS LAFNDSQCQP EATLQQHHLH EEEDKSDEPK RSSAKQSDFS GTIVSYLLTQ ENAVCRQNVW QAYQARASET NQTALQRIAE QRQQAATAAG FTDYSALALS SQQLSSPELV KAFLDSQTQN LQVAPWDIGR TLSQQASAKG PTWQTSDVLS RSFTYLQVFG LQFETIATAN AEKAPTDPNR PHIVRVYHQQ RLLGEIYVAY NHNPQQSSQQ QTLRQSVLGQ QFGQQALDLK PQLSNYKDIE QLTESIAEAV TSLAKASHFY LNNAMGQSQD SHFVASLWLA EVLRHQLFPQ FEQSYLQERE TLAKAYSKQL KVFRAKVAVN FYQDVNSQVY PDLGAEFSAS FGQNWPQTKD YPYSFNAIAN EGPLYYQSLW QVSLAQLIDQ ATLGCQDKLQ LFNLLVVNED SLNVSEQLNA IIGAPVDSAS LIQRISNSAA SEHTGNSDNQ AFNATGSCAF
|
| |