Gene Sbal223_1998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_1998 
Symbol 
ID7086832 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp2358765 
End bp2359022 
Gene Length258 bp 
Protein Length85 aa 
Translation table11 
GC content47% 
IMG OID643460901 
Productphosphocarrier, HPr family 
Protein accessionYP_002357925 
Protein GI217973174 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1925] Phosphotransferase system, HPr-related proteins 
TIGRFAM ID[TIGR01003] Phosphotransferase System HPr (HPr) Family 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000273799 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTACGAAA AATCTGTCAC CATTACCGCC AAACATGGCA TTCACACCCG CCCTGCAGCT 
TTACTGGTTA AAGAAGCCAA AACCTTTGAC TGCGATGTCA TGGTCGAATG CAATGGTAAG
CAAGCCAGCG CTAAAAGTCT GTTTAAGCTA CAAACTTTAG GGCTATATTC TGGCGTCACG
GTAAGAGTGT TTGCCGAAGG TGAACAGGCA CAAGCCGCAG TTGAGAAAGT CTCCGAGCTA
CTGATCACGC TAAGCTAG
 
Protein sequence
MYEKSVTITA KHGIHTRPAA LLVKEAKTFD CDVMVECNGK QASAKSLFKL QTLGLYSGVT 
VRVFAEGEQA QAAVEKVSEL LITLS