Gene Sbal223_1991 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_1991 
Symbol 
ID7086825 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp2351208 
End bp2351921 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content51% 
IMG OID643460894 
Productpeptidase M15B and M15C DD-carboxypeptidase VanY/endolysin 
Protein accessionYP_002357918 
Protein GI217973167 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1876] D-alanyl-D-alanine carboxypeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00373445 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000547334 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGCTAACAC ACCTCGAGAT CCGCCCCGAA ACCGCAAGAC TTTACGGCTT AAGCTCCCCT 
GAATTGGTGG AATATTTAAG TCCGTATCAC CTTGGATATC ATAGCTTTTG GATCGAAGCG
AACACCGCCA TCGCCTTTAA TGCGATGGCG GAAAAAGCCA AAGAGGCGGG CATAGCACTC
GCCATCTGCT CTGCCCATCG CCCTTTTGAG CGACAACTGG CAATTTGGAA TGCCAAGGCC
AGCGGTAAAC GCGCGGTATT AGATGCCAAC GAGCAAGCGA TGAGTATTAA GGGACTGAGT
GACGATGCCA TCGTCGACTT GATTTTGCTC TGGTCGGCGC TACCCGGTGC TTCACGTCAC
CACTGGGGTA CCGATCTCGA TGTGTTCGAT GCGGATCAAA TTGATGTCAA AGCCCTTCGC
CTTATCGAAG CTGAATATGG CCAAACTGGC CCCTGCGCAA AATTGCATGC TTGGCTGGTG
GAAAATGCCC ATGATTTTGG CTTTTATTTC CCGTTTCAAC AGGGGCAAAG CGCGGTCAGT
CCTGAGCCTT GGCACATCAG CTATTTCCCT GTTGCGCAAT TATTGTTGCC ACAGTTCGAT
CGTGCCGAAC TGGCAATCGT TTTAGAAAAC AGTGATATGT TGCTCAAAGA TGCGGTACTC
GCCCGATTAG ACTATCTAGT GGATGAATAC GTGCTGCGTA TCGCTCAGCC TTAG
 
Protein sequence
MLTHLEIRPE TARLYGLSSP ELVEYLSPYH LGYHSFWIEA NTAIAFNAMA EKAKEAGIAL 
AICSAHRPFE RQLAIWNAKA SGKRAVLDAN EQAMSIKGLS DDAIVDLILL WSALPGASRH
HWGTDLDVFD ADQIDVKALR LIEAEYGQTG PCAKLHAWLV ENAHDFGFYF PFQQGQSAVS
PEPWHISYFP VAQLLLPQFD RAELAIVLEN SDMLLKDAVL ARLDYLVDEY VLRIAQP